| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093482
Identifier: 20093482
GI number: 20093482
Start: 37451
End: 38404
Strand: Reverse
Name: 20093482
Synonym: MK0042
Alternate gene names: NA
Gene position: 38404-37451 (Counterclockwise)
Preceding gene: 20093483
Following gene: 20093479
Centisome position: 2.27
GC content: 61.53
Gene sequence:
>954_bases ATGCGAGCCCTAGCACTTCTAGCGTTGGTCCTTGCGGCGGTGGGTGGCGCCGCGGCTGAAGAAGCACCGCTATACGGAGT GCTGACGCACCCGTGGACATTCCAGCTCTCCGCGAACCAGGCCAAGCAGATACCGAAAGAGTACGTGATCTCCGTGGAAG CACCGGCCGGCGCTCAACTACCGCTAGGTAAGGCGTACTACGGGGTGTTCGTAGCCGACGGGAATCACGCCGCGTTGATT GTGGATCTAACTCCGGCGGTGACGGGAGAGACGGATGATGCTGTAGTGGTGGACCCCAACGCGATGTCAGGTAAGCTTCC GCCGGCCGTGAAGTTCAGGCAGTGGAAGCCAGCTCATCTGGCCAAAGGGGCTCTCCTGGCCCTATCGCTGGAGACCAAGC CGCTGCCGGTAGGTCTGTCGCTCAAGATGGTCGCTCCAGAAGAACTGACGATTGAGGTCGGGAAGTTCCAGGTGAAACTC AACCGGGAGCTCCTAGAAGGCCTGGCGCGAGTACTGGCTACGCACGAGTACGGTCACCCCCACGGTAAGAAGAAGACTCC CGTGGGGTACCTGCAGGCGCTCGTGTTCAAGTACTTCGTGAAGGCGTCGGTGACGGGAGCCGAGCCGGAAGAGCTCCAGA AACTCGAGGTCAGTGAGGAGGAGAAGGAAGGGGAGGAAGAGAAGGAGGTCGACGAAGAGACCGGGTACGCGCTCCGTGCG TTCCTAGAAGTGAACGAGCAGCAGGGTCTGACGGACCTGAAGGCGGAGTTCAGTGTTGACAACCTCGAGAACTTGATCGG TGAAGCCGTGACGGTCCTGCAGGATGTCCTCAGCAGCCCCGAGGCGCAGCAGGCGGCAGCCACGGCGGAAAGTGCGCTCA AGAAGTTCGTTCAGGTACCGGTGGCCGCGGTGTGCTTGCTCGGGATCGCGCTGGTGGCCGTCCGACGCCGATAG
Upstream 100 bases:
>100_bases GAAGAACTAAGGCCGATACTGACACCAGCTCAGTCCACAGAGGCGAACGAAAAGGTTAATTATTCGATTTCAGTCTACTA TAAGTGCGGGGGAATGTAAC
Downstream 100 bases:
>100_bases GGGCTTTCTTTCCCCAGGTCGAAATTGTTACGGGCTCTATAACATACGTCTATGCGGTGTCCGGGAGTGGCGCGACCGTC GCCCCGCCGGTATCGGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQLPLGKAYYGVFVADGNHAALI VDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHLAKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKL NRELLEGLARVLATHEYGHPHGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVPVAAVCLLGIALVAVRRR
Sequences:
>Translated_317_residues MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQLPLGKAYYGVFVADGNHAALI VDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHLAKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKL NRELLEGLARVLATHEYGHPHGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVPVAAVCLLGIALVAVRRR >Mature_317_residues MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQLPLGKAYYGVFVADGNHAALI VDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHLAKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKL NRELLEGLARVLATHEYGHPHGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVPVAAVCLLGIALVAVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33959; Mature: 33959
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQL CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHCCHHHEEEEECCCCCCC PLGKAYYGVFVADGNHAALIVDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHL CCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH AKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKLNRELLEGLARVLATHEYGHP HCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCC HGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCCHHHHHHHHCCHHHHH FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVP HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VAAVCLLGIALVAVRRR HHHHHHHHHHHHHHCCC >Mature Secondary Structure MRALALLALVLAAVGGAAAEEAPLYGVLTHPWTFQLSANQAKQIPKEYVISVEAPAGAQL CHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCHHHHCCHHHEEEEECCCCCCC PLGKAYYGVFVADGNHAALIVDLTPAVTGETDDAVVVDPNAMSGKLPPAVKFRQWKPAHL CCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH AKGALLALSLETKPLPVGLSLKMVAPEELTIEVGKFQVKLNRELLEGLARVLATHEYGHP HCCEEEEEEECCCCCCCCCEEEEECCCCEEEEEEEEEEEECHHHHHHHHHHHHHHCCCCC HGKKKTPVGYLQALVFKYFVKASVTGAEPEELQKLEVSEEEKEGEEEKEVDEETGYALRA CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHCCCHHHHHHHHCCHHHHH FLEVNEQQGLTDLKAEFSVDNLENLIGEAVTVLQDVLSSPEAQQAAATAESALKKFVQVP HHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VAAVCLLGIALVAVRRR HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA