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The map label for this gene is 20093479

Identifier: 20093479

GI number: 20093479

Start: 33253

End: 34011

Strand: Reverse

Name: 20093479

Synonym: MK0039

Alternate gene names: NA

Gene position: 34011-33253 (Counterclockwise)

Preceding gene: 20093482

Following gene: 20093476

Centisome position: 2.01

GC content: 59.82

Gene sequence:

>759_bases
ATGGCCGTGGAGAGAGTCTCAACGGGTATTCCGGGGATGGACGAAGTCCTCAACGGGGGGATCCCGGAGCGTAACGCCGT
ACTACTGACCGGAGGTCCGGGAACGGGTAAGACGATATTCTCACAGCAGTTCATCTGGGCAGGGCTGGAAGAAGGTGAGC
CCGGTGTCTTCGTGACGCTCGAGGAGCACCCAGTTCAGGTTAGGAAGAACGTGGAAGGGTTCGGCTGGAACTTCCGGGAG
TACGAGGAGGAGGGCCTCCTAGCCGTCGTGGACGCGTTCACGGGCGGCATAGGCAGGGCGAGCGAGTACGAGAAGTACGT
CGTGAAGGATCCGACGGATGCCAGTGAGCTGATCGGAGTGATCAGGCAAGCCGTCAACGACGTCGAGGCCAAGAGGGTGG
CTATAGACTCCGTGACCCCGTTATACATCGATAAGCCCAGTGTGGCGCGTCGGATCATGTTCAGGCTCAAACGGATGCTC
GCGGGGCTAGGGTGTACCAGCATCCTGGTTAACCAGATCGCCGCCCACGAACGTGGCTTCGGAGGTCCGGGTGTGGAGCA
CGCCGTGGATGGTATTATCCGGCTCGATCTCGACGAAGTAGAAGGAAGACTCTGGAGGTCGTTGATAGTGTGGAAGATGA
GGGGAACTGCACACAGCATGCGGCGTCACCCGTTCGAGATCACCGATGAGGGGATTCGGGTGGACCCGGAGAAAGTCTTC
GTGAAGGAGCGTGGCGAGGTGCGGGAGGTGGAGGATTGA

Upstream 100 bases:

>100_bases
GGCCCCTGCATCTCGGGCAGAGTCCTCCCAAAGGACAACCCCCGATCGCAATGAATTATAATCGAATTGACCTTAGGGGA
GTTCGACGGGGGACGGTCCC

Downstream 100 bases:

>100_bases
AGGACCCGCGCTCACTGCTCCGACACTTCAACTTCGCGATCATCGTGGTGCCCGCCGAGATGTTCGGAGAGCGAGCTACA
GCGTTCCGGAAGACCCTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAVERVSTGIPGMDEVLNGGIPERNAVLLTGGPGTGKTIFSQQFIWAGLEEGEPGVFVTLEEHPVQVRKNVEGFGWNFRE
YEEEGLLAVVDAFTGGIGRASEYEKYVVKDPTDASELIGVIRQAVNDVEAKRVAIDSVTPLYIDKPSVARRIMFRLKRML
AGLGCTSILVNQIAAHERGFGGPGVEHAVDGIIRLDLDEVEGRLWRSLIVWKMRGTAHSMRRHPFEITDEGIRVDPEKVF
VKERGEVREVED

Sequences:

>Translated_252_residues
MAVERVSTGIPGMDEVLNGGIPERNAVLLTGGPGTGKTIFSQQFIWAGLEEGEPGVFVTLEEHPVQVRKNVEGFGWNFRE
YEEEGLLAVVDAFTGGIGRASEYEKYVVKDPTDASELIGVIRQAVNDVEAKRVAIDSVTPLYIDKPSVARRIMFRLKRML
AGLGCTSILVNQIAAHERGFGGPGVEHAVDGIIRLDLDEVEGRLWRSLIVWKMRGTAHSMRRHPFEITDEGIRVDPEKVF
VKERGEVREVED
>Mature_251_residues
AVERVSTGIPGMDEVLNGGIPERNAVLLTGGPGTGKTIFSQQFIWAGLEEGEPGVFVTLEEHPVQVRKNVEGFGWNFREY
EEEGLLAVVDAFTGGIGRASEYEKYVVKDPTDASELIGVIRQAVNDVEAKRVAIDSVTPLYIDKPSVARRIMFRLKRMLA
GLGCTSILVNQIAAHERGFGGPGVEHAVDGIIRLDLDEVEGRLWRSLIVWKMRGTAHSMRRHPFEITDEGIRVDPEKVFV
KERGEVREVED

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 kaiC domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y039_METKA (Q8TZ97)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613326.1
- ProteinModelPortal:   Q8TZ97
- SMR:   Q8TZ97
- GeneID:   1477342
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0039
- NMPDR:   fig|190192.1.peg.39
- HOGENOM:   HBG727042
- OMA:   AQRERYV
- ProtClustDB:   PRK04328
- BioCyc:   MKAN190192:MK0039-MONOMER
- HAMAP:   MF_01076
- InterPro:   IPR014774
- InterPro:   IPR020588
- InterPro:   IPR004504
- InterPro:   IPR010624
- InterPro:   IPR022475
- PRINTS:   PR01874
- TIGRFAMs:   TIGR03877

Pfam domain/function: PF06745 KaiC

EC number: NA

Molecular weight: Translated: 27940; Mature: 27809

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS51146 KAIC; PS50162 RECA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVERVSTGIPGMDEVLNGGIPERNAVLLTGGPGTGKTIFSQQFIWAGLEEGEPGVFVTL
CCCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEE
EEHPVQVRKNVEGFGWNFREYEEEGLLAVVDAFTGGIGRASEYEKYVVKDPTDASELIGV
CCCCHHHHHCCCCCCCCHHHHHHCCCEEEEEHHHCCCCCCCHHCEEEECCCCCHHHHHHH
IRQAVNDVEAKRVAIDSVTPLYIDKPSVARRIMFRLKRMLAGLGCTSILVNQIAAHERGF
HHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GGPGVEHAVDGIIRLDLDEVEGRLWRSLIVWKMRGTAHSMRRHPFEITDEGIRVDPEKVF
CCCCHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEECHHHHH
VKERGEVREVED
HHCCCCCCCCCC
>Mature Secondary Structure 
AVERVSTGIPGMDEVLNGGIPERNAVLLTGGPGTGKTIFSQQFIWAGLEEGEPGVFVTL
CCCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEEE
EEHPVQVRKNVEGFGWNFREYEEEGLLAVVDAFTGGIGRASEYEKYVVKDPTDASELIGV
CCCCHHHHHCCCCCCCCHHHHHHCCCEEEEEHHHCCCCCCCHHCEEEECCCCCHHHHHHH
IRQAVNDVEAKRVAIDSVTPLYIDKPSVARRIMFRLKRMLAGLGCTSILVNQIAAHERGF
HHHHHHHHHHHHEECCCCCCEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
GGPGVEHAVDGIIRLDLDEVEGRLWRSLIVWKMRGTAHSMRRHPFEITDEGIRVDPEKVF
CCCCHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEECHHHHH
VKERGEVREVED
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014