| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093477
Identifier: 20093477
GI number: 20093477
Start: 31183
End: 31749
Strand: Direct
Name: 20093477
Synonym: MK0037
Alternate gene names: NA
Gene position: 31183-31749 (Clockwise)
Preceding gene: 20093460
Following gene: 20093478
Centisome position: 1.84
GC content: 58.2
Gene sequence:
>567_bases TTGGACGTGGAGGCGGTTTACCGATTGAAGCGCATACTCAGGACGGGGTGGTTAGTCCGGGGTATCCCCAGAAGCTCCGT GGAAAGCGTCGCGGAACACTCTTTCGGTGCGGCGATGTTGGCCTGGGAGATCTGCCATCGACTGGCCGAGCGAGGGATCG ACGTCGACCCTTACAAGACTGTCGTTATGGCGCTGATCCACGATCTCCCGGAAGCCCTCACCTTGGACCTAGATGTCGAG GCATCGCGGGTGTTCGGTGATGCCAAGCGCGAAGCGGAGGAAAAAGCCGCCGAATGCGTGTTCGATGAGGAACTACTCGA TCTTTGGAGGGAGTTCGAGCGACGTGAATCCCCGGAGGCGAAGGCTGCCAAGCTCGCGGACACTCTCGACATGGCCCTGC AGGCCTTGGAGTACTCTCAAGTCGGGTTCGAAGCGTATCGGGAGTTCTTAGACTCAGCGGAGCGCGAGGCCAGGGAGCTA GGCCGGGAGTACCTACTAGTTTTCAAAGAGATATTACGCGAGCGGGGGTGGGATAGTAATGAAGGTGGTGGAAAAGGATC TGGATAA
Upstream 100 bases:
>100_bases GATAAGATCCAGCCTGCAACCACCCCAAACACCACGGAGCTCGAAAGCTCCACAGCAGCGATATACTCCCTCCGCAAGGG GCCCACCCGGGGATAGTGAT
Downstream 100 bases:
>100_bases AGGATACATAGAAGTACTTCCTGAAACGTTGGACGATCTGTGGCACTTATACCATGTTGTCAGGAAGGGCGATCTAGTAT TCGCACTGGAAAGACGACGG
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Superfamily; Metal-Dependent Phosphohydrolase; Nucleotidase; Hydrolase Of HD Superfamily; Oxetanocin-Like Protein; HD Superfamily Hydrolase; HD Superfamily Metal-Dependent Phosphohydrolase; HAD Superfamily Hydrolase
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MDVEAVYRLKRILRTGWLVRGIPRSSVESVAEHSFGAAMLAWEICHRLAERGIDVDPYKTVVMALIHDLPEALTLDLDVE ASRVFGDAKREAEEKAAECVFDEELLDLWREFERRESPEAKAAKLADTLDMALQALEYSQVGFEAYREFLDSAEREAREL GREYLLVFKEILRERGWDSNEGGGKGSG
Sequences:
>Translated_188_residues MDVEAVYRLKRILRTGWLVRGIPRSSVESVAEHSFGAAMLAWEICHRLAERGIDVDPYKTVVMALIHDLPEALTLDLDVE ASRVFGDAKREAEEKAAECVFDEELLDLWREFERRESPEAKAAKLADTLDMALQALEYSQVGFEAYREFLDSAEREAREL GREYLLVFKEILRERGWDSNEGGGKGSG >Mature_188_residues MDVEAVYRLKRILRTGWLVRGIPRSSVESVAEHSFGAAMLAWEICHRLAERGIDVDPYKTVVMALIHDLPEALTLDLDVE ASRVFGDAKREAEEKAAECVFDEELLDLWREFERRESPEAKAAKLADTLDMALQALEYSQVGFEAYREFLDSAEREAREL GREYLLVFKEILRERGWDSNEGGGKGSG
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24582262, Length=160, Percent_Identity=31.25, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582260, Length=160, Percent_Identity=31.25, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI20129283, Length=160, Percent_Identity=31.25, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21367; Mature: 21367
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVEAVYRLKRILRTGWLVRGIPRSSVESVAEHSFGAAMLAWEICHRLAERGIDVDPYKT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VVMALIHDLPEALTLDLDVEASRVFGDAKREAEEKAAECVFDEELLDLWREFERRESPEA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KAAKLADTLDMALQALEYSQVGFEAYREFLDSAEREARELGREYLLVFKEILRERGWDSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGGGKGSG CCCCCCCC >Mature Secondary Structure MDVEAVYRLKRILRTGWLVRGIPRSSVESVAEHSFGAAMLAWEICHRLAERGIDVDPYKT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH VVMALIHDLPEALTLDLDVEASRVFGDAKREAEEKAAECVFDEELLDLWREFERRESPEA HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH KAAKLADTLDMALQALEYSQVGFEAYREFLDSAEREARELGREYLLVFKEILRERGWDSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGGGKGSG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA