Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093460

Identifier: 20093460

GI number: 20093460

Start: 19326

End: 19685

Strand: Direct

Name: 20093460

Synonym: MK0020

Alternate gene names: NA

Gene position: 19326-19685 (Clockwise)

Preceding gene: 20093459

Following gene: 20093477

Centisome position: 1.14

GC content: 59.72

Gene sequence:

>360_bases
ATGCCGAAGTTGAACCAGCGAGGACTGGTCGAGTTACGGCGTGAGTTGGAGCGGCGGCTCGTAGAACTGCTGGGCAAACC
GGTACACGTGATGCAGCTGACGATCTTCGCGCTACCGTGCGGATGTGTAGGTGCTTCTCTGGAGGTGCGCAACATCGTCC
GGGAAGACGCTGAGGTCTTCAGGGACCACCTCCGAGACCTCCTACGAGAGATGGTGAAATGGACGCTGGGGAAGGAACCC
GACCTGTACTACGCACGGCTGACTCCGTCCGGTTACGATGTAGTCAGTCTAACGGGCCGCGTAGCTTGCGACGAATGCGA
GAAGAACTTCAAGGGAGCGGCCGACGTGCTCCCGCTCTGA

Upstream 100 bases:

>100_bases
TTCCTAAAGCGGGTAGGTCGGTGTGATCGTCGGTGTTCGAAGTGCGGATTCTGTGCCGAGCTTGCTGAGCGGGCCGTAGA
GCCGTTGGGCGGTCTAGAAG

Downstream 100 bases:

>100_bases
CACGACGCCCTGGAAGCGTTATCGGGGTAACAGCGGCGGGTGTGCCCGGTCCAAAGGACGGGGCGGTCACCGTCCGGTCG
GACGACCATCTCCGCCCCGC

Product: metal-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MPKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVFRDHLRDLLREMVKWTLGKEP
DLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL

Sequences:

>Translated_119_residues
MPKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVFRDHLRDLLREMVKWTLGKEP
DLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL
>Mature_118_residues
PKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVFRDHLRDLLREMVKWTLGKEPD
LYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020380
- ProDom:   PD076426 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13551; Mature: 13420

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVF
CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RDHLRDLLREMVKWTLGKEPDLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PKLNQRGLVELRRELERRLVELLGKPVHVMQLTIFALPCGCVGASLEVRNIVREDAEVF
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RDHLRDLLREMVKWTLGKEPDLYYARLTPSGYDVVSLTGRVACDECEKNFKGAADVLPL
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]