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The map label for this gene is RplO

Identifier: 20093467

GI number: 20093467

Start: 24397

End: 24861

Strand: Reverse

Name: RplO

Synonym: MK0027

Alternate gene names: 20093467

Gene position: 24861-24397 (Counterclockwise)

Preceding gene: 20093468

Following gene: 20093466

Centisome position: 1.47

GC content: 61.72

Gene sequence:

>465_bases
GTGGTCGTGCGGCGGAAGAAGAAGTCCCCGAAGAAGTACCGTGGATCGCGGACCCACGGTGGAGGCAGTCACAAGAACCG
GCGTGGTGCCGGTAACCGCGGCGGGCGCGGTATGGCCGGATCGCACAAACACAAGTGGTTCCACGTCATCAAGTACATGC
CGGATCACTTCGGTAAGCGGGGGTTCAACCGTCCACCCAAGGTGGTTCGGGAGCCCAACACCATCAACGTTGGCGAATTG
GACGCCCTGGCGGACAAGCTCTTGGAGGATGGGATCGCGGAGAAGGACGGCGATAAGATCGTCATCGACGTTACCGACGA
GCGACTGAAACCCTACGGCGGCCCCTTCGACAAGGTGCTAGGAGGCGGTCACGTCAAGAGGCCGCTAGTGGTCGTCGCTC
CCGAGTTCACCGAAAGGGCCGTCGAGAAGCTAGAGGAAGCAGGTGGGGAAGCCCGGGAAGCATAG

Upstream 100 bases:

>100_bases
GAGGCATTAAGAAGCCGTACACGCTCGGTGGCGCGCTCGGCTACCGCGGGAAGGCCATCAACGACCTCCTGGAGCGGATG
ATCTGAAGGGGGCAATCCAC

Downstream 100 bases:

>100_bases
TGCCCGCCGGTTTTTTCAAGGCTCGGCGTCCCAGTCGCCACCAAACGCTTCTGGGAGGAGACGACGTTGGCGGATGACTG
GCTGGAGAGGTTAAGGCCGA

Product: ribosomal protein L15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MVVRRKKKSPKKYRGSRTHGGGSHKNRRGAGNRGGRGMAGSHKHKWFHVIKYMPDHFGKRGFNRPPKVVREPNTINVGEL
DALADKLLEDGIAEKDGDKIVIDVTDERLKPYGGPFDKVLGGGHVKRPLVVVAPEFTERAVEKLEEAGGEAREA

Sequences:

>Translated_154_residues
MVVRRKKKSPKKYRGSRTHGGGSHKNRRGAGNRGGRGMAGSHKHKWFHVIKYMPDHFGKRGFNRPPKVVREPNTINVGEL
DALADKLLEDGIAEKDGDKIVIDVTDERLKPYGGPFDKVLGGGHVKRPLVVVAPEFTERAVEKLEEAGGEAREA
>Mature_154_residues
MVVRRKKKSPKKYRGSRTHGGGSHKNRRGAGNRGGRGMAGSHKHKWFHVIKYMPDHFGKRGFNRPPKVVREPNTINVGEL
DALADKLLEDGIAEKDGDKIVIDVTDERLKPYGGPFDKVLGGGHVKRPLVVVAPEFTERAVEKLEEAGGEAREA

Specific function: Binds to the 23S rRNA

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15_METKA (Q8TZA8)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613314.1
- ProteinModelPortal:   Q8TZA8
- SMR:   Q8TZA8
- GeneID:   1477330
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0027
- NMPDR:   fig|190192.1.peg.27
- HOGENOM:   HBG727142
- OMA:   GSRTCGG
- BioCyc:   MKAN190192:MK0027-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01341_A
- InterPro:   IPR001196
- InterPro:   IPR021131

Pfam domain/function: PF00828 Ribosomal_L18e; SSF52080 Ribosomal_L18e/L15

EC number: NA

Molecular weight: Translated: 17041; Mature: 17041

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRRKKKSPKKYRGSRTHGGGSHKNRRGAGNRGGRGMAGSHKHKWFHVIKYMPDHFGKR
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GFNRPPKVVREPNTINVGELDALADKLLEDGIAEKDGDKIVIDVTDERLKPYGGPFDKVL
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHCCCCCCCHHHHH
GGGHVKRPLVVVAPEFTERAVEKLEEAGGEAREA
CCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MVVRRKKKSPKKYRGSRTHGGGSHKNRRGAGNRGGRGMAGSHKHKWFHVIKYMPDHFGKR
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
GFNRPPKVVREPNTINVGELDALADKLLEDGIAEKDGDKIVIDVTDERLKPYGGPFDKVL
CCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHCCCCCCCHHHHH
GGGHVKRPLVVVAPEFTERAVEKLEEAGGEAREA
CCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014