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The map label for this gene is rpl30p

Identifier: 20093468

GI number: 20093468

Start: 24876

End: 25325

Strand: Reverse

Name: rpl30p

Synonym: MK0028

Alternate gene names: 20093468

Gene position: 25325-24876 (Counterclockwise)

Preceding gene: 20093469

Following gene: 20093467

Centisome position: 1.49

GC content: 61.78

Gene sequence:

>450_bases
GTGCGCGGTCCCGTCGGCGTACGTCGGGATATCGAGGATACCATGCGGATGCTGAAGCTGCTGCGGCGCAACTGGTGCGT
GCTGATCGACGATCGCCCGAGTTACCTGGGTATGCTGCAGAAGATCAAGGATTACGTGACATGGGGCGAGGTGGAACCGG
ACACCGTGGCGGCCTTACTGAAGAAGCGGGGAGAGCTAGAAGGCGGTCGTCCGGTAACCGACGAGTACGTGTCCGAACAC
ACCGAGTACGACAGTGTAGAGGAGTTCGCACGGGCATACTGCGAGTTCGAGGCGGAACTCGATGACATCCCGAAGCTGAA
GCCGTTCTTCCGCCTGCACCCGCCCCGCGGAGGGTACGAAAGGGGAGGCATTAAGAAGCCGTACACGCTCGGTGGCGCGC
TCGGCTACCGCGGGAAGGCCATCAACGACCTCCTGGAGCGGATGATCTGA

Upstream 100 bases:

>100_bases
CGAGGCGGCGGCCCGCCGCGCGAAGGAGGATATCGGGGTCAAGGTCAGCCCGGAGGCTCGGGAGTACGAGCGAGCCACTA
CCCGGCTCGCGGTCGTCCGG

Downstream 100 bases:

>100_bases
AGGGGGCAATCCACGTGGTCGTGCGGCGGAAGAAGAAGTCCCCGAAGAAGTACCGTGGATCGCGGACCCACGGTGGAGGC
AGTCACAAGAACCGGCGTGG

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRGPVGVRRDIEDTMRMLKLLRRNWCVLIDDRPSYLGMLQKIKDYVTWGEVEPDTVAALLKKRGELEGGRPVTDEYVSEH
TEYDSVEEFARAYCEFEAELDDIPKLKPFFRLHPPRGGYERGGIKKPYTLGGALGYRGKAINDLLERMI

Sequences:

>Translated_149_residues
MRGPVGVRRDIEDTMRMLKLLRRNWCVLIDDRPSYLGMLQKIKDYVTWGEVEPDTVAALLKKRGELEGGRPVTDEYVSEH
TEYDSVEEFARAYCEFEAELDDIPKLKPFFRLHPPRGGYERGGIKKPYTLGGALGYRGKAINDLLERMI
>Mature_149_residues
MRGPVGVRRDIEDTMRMLKLLRRNWCVLIDDRPSYLGMLQKIKDYVTWGEVEPDTVAALLKKRGELEGGRPVTDEYVSEH
TEYDSVEEFARAYCEFEAELDDIPKLKPFFRLHPPRGGYERGGIKKPYTLGGALGYRGKAINDLLERMI

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL30_METKA (Q8TZA7)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613315.1
- HSSP:   P14121
- ProteinModelPortal:   Q8TZA7
- SMR:   Q8TZA7
- GeneID:   1477331
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0028
- NMPDR:   fig|190192.1.peg.28
- HOGENOM:   HBG297538
- OMA:   DYITWGE
- ProtClustDB:   PRK06049
- BioCyc:   MKAN190192:MK0028-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01371_A
- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR016082
- Gene3D:   G3DSA:1.10.15.30
- Gene3D:   G3DSA:3.30.1390.20
- TIGRFAMs:   TIGR01309

Pfam domain/function: PF00327 Ribosomal_L30; SSF55129 Ribosomal_L30

EC number: NA

Molecular weight: Translated: 17195; Mature: 17195

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS00634 RIBOSOMAL_L30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPVGVRRDIEDTMRMLKLLRRNWCVLIDDRPSYLGMLQKIKDYVTWGEVEPDTVAALL
CCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KKRGELEGGRPVTDEYVSEHTEYDSVEEFARAYCEFEAELDDIPKLKPFFRLHPPRGGYE
HHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
RGGIKKPYTLGGALGYRGKAINDLLERMI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MRGPVGVRRDIEDTMRMLKLLRRNWCVLIDDRPSYLGMLQKIKDYVTWGEVEPDTVAALL
CCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KKRGELEGGRPVTDEYVSEHTEYDSVEEFARAYCEFEAELDDIPKLKPFFRLHPPRGGYE
HHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
RGGIKKPYTLGGALGYRGKAINDLLERMI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014