Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093457

Identifier: 20093457

GI number: 20093457

Start: 16252

End: 17787

Strand: Direct

Name: 20093457

Synonym: MK0017

Alternate gene names: NA

Gene position: 16252-17787 (Clockwise)

Preceding gene: 20093456

Following gene: 20093458

Centisome position: 0.96

GC content: 63.74

Gene sequence:

>1536_bases
TTGCTCGACCTCCTGCACGAAGCTTGTGAATCGCTCGACGCAGCGCTCGAGCTGAAGCGGCTGGCTTACGAGGGGAAGCT
AAGCGTCGATGAGGTGGTTACGGACCTGGGAGAACTCACGGATCGGGAACTCGAAGCCCTAGGTGACAATCTGCGCACGT
TTCCGATGGGCTGCGATCTGATCGAGCTGGCCGTAGGTCCCTGTGCCTCCGATTACTCCCCGGATGTCCTCCTTGCGAAC
GCCATCCTGGCGGACCGGATGGGATTACCGCTCCACGTGTGCGCGTACGCGGTGGCGGACGTCGCCGAGAACTACGGGAT
GAGGCCTATCGAGTTGTTCCGTCGCCTTGTGAGGAACGTTCGCGTGCCGGTGGACGTGGATCATATAGGAGCTCACGGCC
CGATGCGGTTTCCGCGAGATATAACCGCGTGTGAGGGAACTTGCTACCTGGAAGGGCCGCCGTTCAAAGAGTGCCCTCGA
GGTAGGATACATCGGCGGTTGATCGACAAGGAGAGGCAGCAGGGAGAGGATCTGGAGGAATGGGCGGAACTGGCGGCCTC
GATCTGTGTGAACGTCACGGGAGAAGGGGGACAGGACGCGGAAGCCCACGCCGCTCCACTCGATGAGATGAAGCGCGTCG
CCGAAACGGCTCGACACTCGGGTGCGGGCGTCGGAGCCATCCTGCACGTCGCGGACGGCGAGGACGAGTTCGCCGACGGC
CTCAAAGCGGCCGTCGAGGAGGTGAAAGCGGACTACCTAGCGGTCGAAGGAGGTCCGTTCAACCGAGCCGAAGATCGACT
CTCGGCCTTCCGACGGGCCGTAGTAGCGTGCAGGGTATTCGCGCCCGGAAAGGTCGTCCTGACCAACGGGGCTTACGAGG
ACGAACTCGTCGTGGGACTGAGAGCAGGCTTGAACGGCGCCCTCTCAGGGTTCCCCAAAAATCACCACGGATACATGGTC
GGGTACGAGCCCGGAACCGCGCGACGCGGTAAGTTCGGACTCCCAAAGGTTCTCGCGATCATGCGGAAGACGTTGGGCTC
ACGGTACGGGAACACCAAGGTGCCGGCCGGCTGGGAGGAACTCGAAGGGATCACGCGGGCCGCTCTCTTCCTGGGATCCA
ACTTACTGTACCCGCGAGACGTGGCCGGCATCCCGATAGGTGACGTCCACTGGGTAGCCGCCCTCCGGTCCAACGCCGCC
CGCGAGTTGTCCGATGAGGTCAGGTCCGTCGAGGAGGTCGCATCGGAAGTTGACGCCGATACCGTCGCCCTGTTGGGTGG
GAGGTTCCCGGCCTGGGGTCTCGCCTTGACCCTCGACGAGCTGGGCGTGTCCGAAGTGCTGATAAGCGATCCGGACGCGT
GGGTCGAGAGGGCCACCGTACGGTTGCTGGACGAGGAGCTCGACGCCACGGTACACGCAATGGCTGGGGACGATCGCAAG
GCCGTGAAGGAAGCAGACGCGGCCTTCGTGACGGCCGTCATGCCGGGGATAGCCGAGCGCCTAGCCGAGAGGACCGGGGC
GATGACCGTGTGCTGA

Upstream 100 bases:

>100_bases
AGGTTAAGGGTGTCGGAAACCCGCGGACCGGCAACCTGGATAGGGTCGTGGAGCTCATCGAGGGGTTCGGGCTCAAGCCC
GAGCTCAGGGGTGACCGAGC

Downstream 100 bases:

>100_bases
AGGAGACGCTGCTCAAGGCCTGGTGGGAGTCCTGGGAAGGCACCCGCCGGGGTGACGAGGAGCGGGAGGTCGAAGGGCTC
CGCGAGTACTTGACCTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDLIELAVGPCASDYSPDVLLAN
AILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNVRVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPR
GRIHRRLIDKERQQGEDLEEWAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG
LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGLRAGLNGALSGFPKNHHGYMV
GYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEELEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAA
RELSDEVRSVEEVASEVDADTVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK
AVKEADAAFVTAVMPGIAERLAERTGAMTVC

Sequences:

>Translated_511_residues
MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDLIELAVGPCASDYSPDVLLAN
AILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNVRVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPR
GRIHRRLIDKERQQGEDLEEWAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG
LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGLRAGLNGALSGFPKNHHGYMV
GYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEELEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAA
RELSDEVRSVEEVASEVDADTVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK
AVKEADAAFVTAVMPGIAERLAERTGAMTVC
>Mature_511_residues
MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDLIELAVGPCASDYSPDVLLAN
AILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNVRVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPR
GRIHRRLIDKERQQGEDLEEWAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG
LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGLRAGLNGALSGFPKNHHGYMV
GYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEELEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAA
RELSDEVRSVEEVASEVDADTVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK
AVKEADAAFVTAVMPGIAERLAERTGAMTVC

Specific function: Unknown

COG id: COG4018

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1137 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016760 [H]

Pfam domain/function: PF10113 Fibrillarin_2 [H]

EC number: NA

Molecular weight: Translated: 55098; Mature: 55098

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH
IELAVGPCASDYSPDVLLANAILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNV
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPRGRIHRRLIDKERQQGEDLEE
CCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHCCCCHHH
WAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG
HHHHHHHHHEEECCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGL
HHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHH
RAGLNGALSGFPKNHHGYMVGYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEE
HHCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
LEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAARELSDEVRSVEEVASEVDAD
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK
HHHHHCCCCCCCHHEEEHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AVKEADAAFVTAVMPGIAERLAERTGAMTVC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLDLLHEACESLDAALELKRLAYEGKLSVDEVVTDLGELTDRELEALGDNLRTFPMGCDL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCH
IELAVGPCASDYSPDVLLANAILADRMGLPLHVCAYAVADVAENYGMRPIELFRRLVRNV
HHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
RVPVDVDHIGAHGPMRFPRDITACEGTCYLEGPPFKECPRGRIHRRLIDKERQQGEDLEE
CCCCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHCCCHHHHHHHHHHHHHHCCCCHHH
WAELAASICVNVTGEGGQDAEAHAAPLDEMKRVAETARHSGAGVGAILHVADGEDEFADG
HHHHHHHHHEEECCCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHH
LKAAVEEVKADYLAVEGGPFNRAEDRLSAFRRAVVACRVFAPGKVVLTNGAYEDELVVGL
HHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHH
RAGLNGALSGFPKNHHGYMVGYEPGTARRGKFGLPKVLAIMRKTLGSRYGNTKVPAGWEE
HHCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHH
LEGITRAALFLGSNLLYPRDVAGIPIGDVHWVAALRSNAARELSDEVRSVEEVASEVDAD
HHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TVALLGGRFPAWGLALTLDELGVSEVLISDPDAWVERATVRLLDEELDATVHAMAGDDRK
HHHHHCCCCCCCHHEEEHHHCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AVKEADAAFVTAVMPGIAERLAERTGAMTVC
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]