Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093458

Identifier: 20093458

GI number: 20093458

Start: 17781

End: 18263

Strand: Direct

Name: 20093458

Synonym: MK0018

Alternate gene names: NA

Gene position: 17781-18263 (Clockwise)

Preceding gene: 20093457

Following gene: 20093459

Centisome position: 1.05

GC content: 63.35

Gene sequence:

>483_bases
GTGCTGAAGGAGACGCTGCTCAAGGCCTGGTGGGAGTCCTGGGAAGGCACCCGCCGGGGTGACGAGGAGCGGGAGGTCGA
AGGGCTCCGCGAGTACTTGACCTCGGCGGACCGGCTCGCGGTGGTAACGGGTAACGAGGACAAGCTCCGGGCGGTCAACA
AAGTCCTCCGCAGGTTCGGGTTGCCGGAAGCCGAGATGATCAGAGTACCGACGGAGATGGCGGACGCGACGCCGTGTCCC
GCCATCTTCAAGGCGATCATGGGAGTTCAAGTGTCGGACGCCGACGTAGTGATCGCTAGAGGGAGGTTAGGGGTTCCGGG
ATCCGGAGCCATGACCGTGTTCATGGACGCGCGATGTAGGTTGCTGACGGCGGCCCTTTCTCCACCTCACGTCCTTCACG
AGATGTCGGTGAAAGAGGCTATGGAGCGCGAAGCGGAGGAAGCCCTGCGGCGTCTGGGTATGAGGGAGACCACGTCCCGT
TAA

Upstream 100 bases:

>100_bases
ACGATCGCAAGGCCGTGAAGGAAGCAGACGCGGCCTTCGTGACGGCCGTCATGCCGGGGATAGCCGAGCGCCTAGCCGAG
AGGACCGGGGCGATGACCGT

Downstream 100 bases:

>100_bases
CTCGCAGTAATACCCGAAGCTCGGTCGGAAATAAAAAACGCTCTTCTTCATTTCCCGAACCACCAATCCTCCGGGGACGG
GCAGTGTTCTCCGTTCCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFGLPEAEMIRVPTEMADATPCP
AIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR

Sequences:

>Translated_160_residues
MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFGLPEAEMIRVPTEMADATPCP
AIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR
>Mature_160_residues
MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFGLPEAEMIRVPTEMADATPCP
AIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR

Specific function: Unknown

COG id: COG4019

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010254
- InterPro:   IPR012019 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17897; Mature: 17897

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFG
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHC
LPEAEMIRVPTEMADATPCPAIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCR
CCHHHHEECCHHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHH
LLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFG
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHC
LPEAEMIRVPTEMADATPCPAIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCR
CCHHHHEECCHHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHH
LLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]