| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093458
Identifier: 20093458
GI number: 20093458
Start: 17781
End: 18263
Strand: Direct
Name: 20093458
Synonym: MK0018
Alternate gene names: NA
Gene position: 17781-18263 (Clockwise)
Preceding gene: 20093457
Following gene: 20093459
Centisome position: 1.05
GC content: 63.35
Gene sequence:
>483_bases GTGCTGAAGGAGACGCTGCTCAAGGCCTGGTGGGAGTCCTGGGAAGGCACCCGCCGGGGTGACGAGGAGCGGGAGGTCGA AGGGCTCCGCGAGTACTTGACCTCGGCGGACCGGCTCGCGGTGGTAACGGGTAACGAGGACAAGCTCCGGGCGGTCAACA AAGTCCTCCGCAGGTTCGGGTTGCCGGAAGCCGAGATGATCAGAGTACCGACGGAGATGGCGGACGCGACGCCGTGTCCC GCCATCTTCAAGGCGATCATGGGAGTTCAAGTGTCGGACGCCGACGTAGTGATCGCTAGAGGGAGGTTAGGGGTTCCGGG ATCCGGAGCCATGACCGTGTTCATGGACGCGCGATGTAGGTTGCTGACGGCGGCCCTTTCTCCACCTCACGTCCTTCACG AGATGTCGGTGAAAGAGGCTATGGAGCGCGAAGCGGAGGAAGCCCTGCGGCGTCTGGGTATGAGGGAGACCACGTCCCGT TAA
Upstream 100 bases:
>100_bases ACGATCGCAAGGCCGTGAAGGAAGCAGACGCGGCCTTCGTGACGGCCGTCATGCCGGGGATAGCCGAGCGCCTAGCCGAG AGGACCGGGGCGATGACCGT
Downstream 100 bases:
>100_bases CTCGCAGTAATACCCGAAGCTCGGTCGGAAATAAAAAACGCTCTTCTTCATTTCCCGAACCACCAATCCTCCGGGGACGG GCAGTGTTCTCCGTTCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFGLPEAEMIRVPTEMADATPCP AIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR
Sequences:
>Translated_160_residues MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFGLPEAEMIRVPTEMADATPCP AIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR >Mature_160_residues MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFGLPEAEMIRVPTEMADATPCP AIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCRLLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR
Specific function: Unknown
COG id: COG4019
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010254 - InterPro: IPR012019 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17897; Mature: 17897
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFG CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHC LPEAEMIRVPTEMADATPCPAIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCR CCHHHHEECCHHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHH LLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLKETLLKAWWESWEGTRRGDEEREVEGLREYLTSADRLAVVTGNEDKLRAVNKVLRRFG CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHC LPEAEMIRVPTEMADATPCPAIFKAIMGVQVSDADVVIARGRLGVPGSGAMTVFMDARCR CCHHHHEECCHHHCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHH LLTAALSPPHVLHEMSVKEAMEREAEEALRRLGMRETTSR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]