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The map label for this gene is 33359543

Identifier: 33359543

GI number: 33359543

Start: 1069932

End: 1070624

Strand: Reverse

Name: 33359543

Synonym: PF1121

Alternate gene names: NA

Gene position: 1070624-1069932 (Counterclockwise)

Preceding gene: 18977494

Following gene: 18977492

Centisome position: 56.1

GC content: 44.3

Gene sequence:

>693_bases
TTGGAGAGGTTATTGAGAGTTTTGCGGAAGAAGCTGGGAAGTATTATTTGTAAAGGTGAGGCAATGATAAGGGTAAAACT
GAAGTCCTGGACGGCTTCATTTCGTTATCCCACCTTTCAAGCTGGAAATCAACCTACCCTTCCAGTTCCCCCTCCCTCCA
CTATTCAGGGAATACTTTCCGCTGCAAAGGGCGAGCCTGTATATCTCTCTGAACTCCCTTACGTTGGCTATGTTTTCAAA
AGTGAAGGTAGGGGAGTTGACTTAGAGAGGATATATTCCCTCTCTAAGGAAGAAACAGATGTTATTGCAAGAGAAGTTCT
TTATAATGCGGAACTCAACCTCTACCTTCCAGATGAGTGGGAGAGGTATTTCAGAAAGCCTAGATACCAGCTTCTCCTGG
GAAGATCAAGCGATCTAGCAACCGTGGAGGAAATTAAGAAAGTGGAGCTTGGGGAGAAAAAAGCTCCAATAGGAGGGACA
GTTGTGCCAATAGACCTGGGCATACCTGGGATAGTTCACGCACTGGTTGTTGAGTATGACTATTCAACGATTCCCAGGAA
GCCAAGACTAATTAAACCCTTTGTAATTCTTCCCTTCCCTAGAAATATGGGAGAAAGGAAAAGACAAACGGCAAAGGCCT
TATATGATCCTGATTTAGACATAGGAGTTTATCTGCATAGGTGGAGGCCATGA

Upstream 100 bases:

>100_bases
GAGCTGTTTCTAGGATACGACAAGGGATTTGTAAAAGAGCTAGGACTGGACATAGAGGCATTGAAGTCTGCTGTTAGCAT
TGAAGTAATGGAAGGAAAAG

Downstream 100 bases:

>100_bases
AACCGTGCTTTGCAAAATTTCTTCCACATGACTTCCTAGAGTGTCACGTCATGGACATAATAAATGTTCTCAAAAGCATG
AAAGTAGCTTTCCCCTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas5 Family Protein; Metal Dependent Phosphohydrolase; CRISPR-Associated Tneap Subtype; DNA Repair Protein

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MERLLRVLRKKLGSIICKGEAMIRVKLKSWTASFRYPTFQAGNQPTLPVPPPSTIQGILSAAKGEPVYLSELPYVGYVFK
SEGRGVDLERIYSLSKEETDVIAREVLYNAELNLYLPDEWERYFRKPRYQLLLGRSSDLATVEEIKKVELGEKKAPIGGT
VVPIDLGIPGIVHALVVEYDYSTIPRKPRLIKPFVILPFPRNMGERKRQTAKALYDPDLDIGVYLHRWRP

Sequences:

>Translated_230_residues
MERLLRVLRKKLGSIICKGEAMIRVKLKSWTASFRYPTFQAGNQPTLPVPPPSTIQGILSAAKGEPVYLSELPYVGYVFK
SEGRGVDLERIYSLSKEETDVIAREVLYNAELNLYLPDEWERYFRKPRYQLLLGRSSDLATVEEIKKVELGEKKAPIGGT
VVPIDLGIPGIVHALVVEYDYSTIPRKPRLIKPFVILPFPRNMGERKRQTAKALYDPDLDIGVYLHRWRP
>Mature_230_residues
MERLLRVLRKKLGSIICKGEAMIRVKLKSWTASFRYPTFQAGNQPTLPVPPPSTIQGILSAAKGEPVYLSELPYVGYVFK
SEGRGVDLERIYSLSKEETDVIAREVLYNAELNLYLPDEWERYFRKPRYQLLLGRSSDLATVEEIKKVELGEKKAPIGGT
VVPIDLGIPGIVHALVVEYDYSTIPRKPRLIKPFVILPFPRNMGERKRQTAKALYDPDLDIGVYLHRWRP

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26269; Mature: 26269

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLLRVLRKKLGSIICKGEAMIRVKLKSWTASFRYPTFQAGNQPTLPVPPPSTIQGILS
CHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AAKGEPVYLSELPYVGYVFKSEGRGVDLERIYSLSKEETDVIAREVLYNAELNLYLPDEW
HCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEEEECHHH
ERYFRKPRYQLLLGRSSDLATVEEIKKVELGEKKAPIGGTVVPIDLGIPGIVHALVVEYD
HHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC
YSTIPRKPRLIKPFVILPFPRNMGERKRQTAKALYDPDLDIGVYLHRWRP
CCCCCCCCCEECCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure
MERLLRVLRKKLGSIICKGEAMIRVKLKSWTASFRYPTFQAGNQPTLPVPPPSTIQGILS
CHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
AAKGEPVYLSELPYVGYVFKSEGRGVDLERIYSLSKEETDVIAREVLYNAELNLYLPDEW
HCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEEEECHHH
ERYFRKPRYQLLLGRSSDLATVEEIKKVELGEKKAPIGGTVVPIDLGIPGIVHALVVEYD
HHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHCCC
YSTIPRKPRLIKPFVILPFPRNMGERKRQTAKALYDPDLDIGVYLHRWRP
CCCCCCCCCEECCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA