| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is 18977494
Identifier: 18977494
GI number: 18977494
Start: 1070572
End: 1071627
Strand: Reverse
Name: 18977494
Synonym: PF1122
Alternate gene names: NA
Gene position: 1071627-1070572 (Counterclockwise)
Preceding gene: 33359544
Following gene: 33359543
Centisome position: 56.16
GC content: 42.05
Gene sequence:
>1056_bases ATGAAGTTTGCTGCAGGTTTTGTCTTGATTGACGCCCCCCACTCTGCCCTGAACATGTTGGGGATTGACGAAAATCTGCC CGACAGAAACGTTACGAGAGTAAAAACCCTCAGAAGGGGAGGAAACAGATACGTATATGTCTCTCCACAGGCATGGAGAT ACTGGTGGAGAACCACACTTAAAGAGTATTTCAAGTGGGAACTCTCTCCGCTGTTTAGGGAAGAGAAACAAGTGTTTACA GCGGCAAATCCAATTAAATACCCAGATGATGATGTTTTTGGATATATGAGGGCTTATAAGAAAAACAACGTAAATGTCAC TGTTACGAGGGTTTCTCCACTAAAAAACACGCCTCTAATTTCAGTACTTCCTGACAGGAGCTCTCTAACAATAGATGAAG GCTACGCCTCTAGGCATGAGGGGGATCCCGTTCCCTACAGCCAAGAATTTTATTCAACAGTTCTCAAGGGAGCATTTTCA CTTGACTTGGATTTGGTGGGTAGATTTACAACTAAGAACAAGGCTGGATATAAGAACCTACTTACAAGAAGCGACATTCC AAAGAAGGGAAAGGCCGGAGAGATAGTTAAAGAAATTGAAGAATTAGAAAAGTTGGCTAGGGAGATTGGAGTGGAGATTA AGGAAGAGGAGTGGATAATGCCTAAAGAGGTTAGAAAAAAGAGAGCAGTAGAAACTATAAAGGCCCTTCGCTACTTGACT GGAGGGGCAAAACAGACTCAATATCACACTGACGTTACTCCAAAGTTCTTCCTGGGGATAATTGTCAACGGTGGCATAAA CCCATTCATTAGTGGAATTGTCAGGGAAGAAAAAGGAGAAATAATTTTAGATGCTGAAGCGTTAGCTACAAGGTTGGAAG ACTTCTCGGAGATAATAGATTCTGAGCTGTTTCTAGGATACGACAAGGGATTTGTAAAAGAGCTAGGACTGGACATAGAG GCATTGAAGTCTGCTGTTAGCATTGAAGTAATGGAAGGAAAAGTTGGAGAGGTTATTGAGAGTTTTGCGGAAGAAGCTGG GAAGTATTATTTGTAA
Upstream 100 bases:
>100_bases TTTTGCTTTTTAGGATTTATGAAAAGCTCCACGACAGACTTGCTAAGATTGAAGCTTCTGAAGAAGCTGAATTTTATGGA GCTGGAGAGGAGGTGGAAGA
Downstream 100 bases:
>100_bases AGGTGAGGCAATGATAAGGGTAAAACTGAAGTCCTGGACGGCTTCATTTCGTTATCCCACCTTTCAAGCTGGAAATCAAC CTACCCTTCCAGTTCCCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Autoregulator DevR Family; CRISPR-Associated Regulatory Protein DevR Family; DNA Repair Protein
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKFAAGFVLIDAPHSALNMLGIDENLPDRNVTRVKTLRRGGNRYVYVSPQAWRYWWRTTLKEYFKWELSPLFREEKQVFT AANPIKYPDDDVFGYMRAYKKNNVNVTVTRVSPLKNTPLISVLPDRSSLTIDEGYASRHEGDPVPYSQEFYSTVLKGAFS LDLDLVGRFTTKNKAGYKNLLTRSDIPKKGKAGEIVKEIEELEKLAREIGVEIKEEEWIMPKEVRKKRAVETIKALRYLT GGAKQTQYHTDVTPKFFLGIIVNGGINPFISGIVREEKGEIILDAEALATRLEDFSEIIDSELFLGYDKGFVKELGLDIE ALKSAVSIEVMEGKVGEVIESFAEEAGKYYL
Sequences:
>Translated_351_residues MKFAAGFVLIDAPHSALNMLGIDENLPDRNVTRVKTLRRGGNRYVYVSPQAWRYWWRTTLKEYFKWELSPLFREEKQVFT AANPIKYPDDDVFGYMRAYKKNNVNVTVTRVSPLKNTPLISVLPDRSSLTIDEGYASRHEGDPVPYSQEFYSTVLKGAFS LDLDLVGRFTTKNKAGYKNLLTRSDIPKKGKAGEIVKEIEELEKLAREIGVEIKEEEWIMPKEVRKKRAVETIKALRYLT GGAKQTQYHTDVTPKFFLGIIVNGGINPFISGIVREEKGEIILDAEALATRLEDFSEIIDSELFLGYDKGFVKELGLDIE ALKSAVSIEVMEGKVGEVIESFAEEAGKYYL >Mature_351_residues MKFAAGFVLIDAPHSALNMLGIDENLPDRNVTRVKTLRRGGNRYVYVSPQAWRYWWRTTLKEYFKWELSPLFREEKQVFT AANPIKYPDDDVFGYMRAYKKNNVNVTVTRVSPLKNTPLISVLPDRSSLTIDEGYASRHEGDPVPYSQEFYSTVLKGAFS LDLDLVGRFTTKNKAGYKNLLTRSDIPKKGKAGEIVKEIEELEKLAREIGVEIKEEEWIMPKEVRKKRAVETIKALRYLT GGAKQTQYHTDVTPKFFLGIIVNGGINPFISGIVREEKGEIILDAEALATRLEDFSEIIDSELFLGYDKGFVKELGLDIE ALKSAVSIEVMEGKVGEVIESFAEEAGKYYL
Specific function: Unknown
COG id: COG1857
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39871; Mature: 39871
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFAAGFVLIDAPHSALNMLGIDENLPDRNVTRVKTLRRGGNRYVYVSPQAWRYWWRTTL CCCCCCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHH KEYFKWELSPLFREEKQVFTAANPIKYPDDDVFGYMRAYKKNNVNVTVTRVSPLKNTPLI HHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE SVLPDRSSLTIDEGYASRHEGDPVPYSQEFYSTVLKGAFSLDLDLVGRFTTKNKAGYKNL EEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHEEECCCCCCCHHHH LTRSDIPKKGKAGEIVKEIEELEKLAREIGVEIKEEEWIMPKEVRKKRAVETIKALRYLT HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHC GGAKQTQYHTDVTPKFFLGIIVNGGINPFISGIVREEKGEIILDAEALATRLEDFSEIID CCCCCCCEECCCCHHHEEEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH SELFLGYDKGFVKELGLDIEALKSAVSIEVMEGKVGEVIESFAEEAGKYYL HHHEECCCCHHHHHHCCCHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKFAAGFVLIDAPHSALNMLGIDENLPDRNVTRVKTLRRGGNRYVYVSPQAWRYWWRTTL CCCCCCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHH KEYFKWELSPLFREEKQVFTAANPIKYPDDDVFGYMRAYKKNNVNVTVTRVSPLKNTPLI HHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEE SVLPDRSSLTIDEGYASRHEGDPVPYSQEFYSTVLKGAFSLDLDLVGRFTTKNKAGYKNL EEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHEEECCCCCCCHHHH LTRSDIPKKGKAGEIVKEIEELEKLAREIGVEIKEEEWIMPKEVRKKRAVETIKALRYLT HHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHC GGAKQTQYHTDVTPKFFLGIIVNGGINPFISGIVREEKGEIILDAEALATRLEDFSEIID CCCCCCCEECCCCHHHEEEEEECCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH SELFLGYDKGFVKELGLDIEALKSAVSIEVMEGKVGEVIESFAEEAGKYYL HHHEECCCCHHHHHHCCCHHHHHHHHEEEECCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA