Click here to switch to the map view.

The map label for this gene is 18978339

Identifier: 18978339

GI number: 18978339

Start: 1815891

End: 1817174

Strand: Direct

Name: 18978339

Synonym: PF1967

Alternate gene names: NA

Gene position: 1815891-1817174 (Clockwise)

Preceding gene: 18978337

Following gene: 18978340

Centisome position: 95.16

GC content: 46.5

Gene sequence:

>1284_bases
ATGAACAAGAAAATTAGCATGCTATTAATTGTACTTCTAGGGATAGCAGTGTTTGCCAGTGGATGCATTGGAGGGGGAGG
TGCAAAGATAGTCTGGGCTTCTACCCAGCTCAACCCACCAGAAGAGAGAGCGTTTGTTTTAAACGAGCTAATTCCTCCAT
TCAAGGAGGAGACAGGGATTGACGTAGAGTTTGTTCCACTAAGCTATGCTGACCTCTCAACTAGACTTGAGGCTGAGATG
AGCTCTGGAGAAGTAACCCTAGATGTGGTTGCAGACCTTCACGGGGGATTGGATTACTTCAACTCCAAAGGATGGCTAAC
TGATCTTTCCGGAAAGATAAAGGAACTGCAAGGAAGAACATTTATTGAGAGCTACCTACAATACGCCACAGATCAAAATG
GAAAAGTATTCTACGTTCCATGGATGAGTGCTACCTACGTAATGGTGGTCAATAAGGAAGCATTCAAGTACCTGCCTGAA
GGCCTAACTCAGGAAGATGTAATGAAGGGGACGGAGAAGTGGACTTACGATGCCCTCCTAGAGTGGCTTGAGAATATATA
CAAGCAGACTGGAAAGAAGGCCTTTGGATTACCCGCTGGTCCAAAGGGACTACTCCATAGGTTCATCCACGGCTACCTAT
ACCCAAGCTTTACTGGGTATGAGACAAAGAAATTCGATAGCCCTGAGGCCCTAGAGATGTGGGATTACTTCAAAGACCTC
TGGGAGTACACTAACCCAGCCTCAACAACGTGGGATGCCATGGCAGATCCTCTACTGCAAGGGGATGTTTTGATTGCATG
GGATCACACAGCTAGAATAAAGAATGCAATAACCACAAAGCCCGATCAATTCGTTGTAGTCCCAGTTCCCAGGGGGCCAA
AGGGAAGAGGATTCATTGTTGTTCTAGCCGGACTTGCCATACCCAAGAATGCTCCACACCAGGAAGAAGCATGGAAGTTG
ATTGAATACTTAACAAGGCCAGAAACCCAGGTTAAAGTAATGGAGAAGGTAGGATTCTTCCCAACAGTTAAGGAGGCAAG
CAATGCAGTTCCTGAGGGCCCACTAAAGATTTTAGTTAACGGAGTTACTGCCCAGTCCTCAACAAGCGATGCCTTAATCG
TCATGATCCCCAACCTGGGAGAGAAGGGTGGAGAGTTCAGCGCAATTTACAGAGATGCCTTCACTAGAATAGTACTCAAC
GGAGAGGATCCAGAGAGTGTGCTGAAAGAGTTGGGTCCAAAGCTTCACAAACTCTTTGAAGAGGTAGGAGTTCCAGAGCC
TTGA

Upstream 100 bases:

>100_bases
TACCAAAATTTGGATTGTTAATTTCCCATTGATCAATTAAAGGCCAAAAAGGGAAAAATAAATAAAGGTTAGTATAGTTA
ATGTAATATGGTGAGCTAAG

Downstream 100 bases:

>100_bases
TTTTATTCCCTTTTTTCTTTCTTTTTAGGTGATGGGCAATGAAAATAAGAAGTTCTCATATTCCCTACCTTTTAATTTTA
CCGGCCGTGGCTTACCTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MNKKISMLLIVLLGIAVFASGCIGGGGAKIVWASTQLNPPEERAFVLNELIPPFKEETGIDVEFVPLSYADLSTRLEAEM
SSGEVTLDVVADLHGGLDYFNSKGWLTDLSGKIKELQGRTFIESYLQYATDQNGKVFYVPWMSATYVMVVNKEAFKYLPE
GLTQEDVMKGTEKWTYDALLEWLENIYKQTGKKAFGLPAGPKGLLHRFIHGYLYPSFTGYETKKFDSPEALEMWDYFKDL
WEYTNPASTTWDAMADPLLQGDVLIAWDHTARIKNAITTKPDQFVVVPVPRGPKGRGFIVVLAGLAIPKNAPHQEEAWKL
IEYLTRPETQVKVMEKVGFFPTVKEASNAVPEGPLKILVNGVTAQSSTSDALIVMIPNLGEKGGEFSAIYRDAFTRIVLN
GEDPESVLKELGPKLHKLFEEVGVPEP

Sequences:

>Translated_427_residues
MNKKISMLLIVLLGIAVFASGCIGGGGAKIVWASTQLNPPEERAFVLNELIPPFKEETGIDVEFVPLSYADLSTRLEAEM
SSGEVTLDVVADLHGGLDYFNSKGWLTDLSGKIKELQGRTFIESYLQYATDQNGKVFYVPWMSATYVMVVNKEAFKYLPE
GLTQEDVMKGTEKWTYDALLEWLENIYKQTGKKAFGLPAGPKGLLHRFIHGYLYPSFTGYETKKFDSPEALEMWDYFKDL
WEYTNPASTTWDAMADPLLQGDVLIAWDHTARIKNAITTKPDQFVVVPVPRGPKGRGFIVVLAGLAIPKNAPHQEEAWKL
IEYLTRPETQVKVMEKVGFFPTVKEASNAVPEGPLKILVNGVTAQSSTSDALIVMIPNLGEKGGEFSAIYRDAFTRIVLN
GEDPESVLKELGPKLHKLFEEVGVPEP
>Mature_427_residues
MNKKISMLLIVLLGIAVFASGCIGGGGAKIVWASTQLNPPEERAFVLNELIPPFKEETGIDVEFVPLSYADLSTRLEAEM
SSGEVTLDVVADLHGGLDYFNSKGWLTDLSGKIKELQGRTFIESYLQYATDQNGKVFYVPWMSATYVMVVNKEAFKYLPE
GLTQEDVMKGTEKWTYDALLEWLENIYKQTGKKAFGLPAGPKGLLHRFIHGYLYPSFTGYETKKFDSPEALEMWDYFKDL
WEYTNPASTTWDAMADPLLQGDVLIAWDHTARIKNAITTKPDQFVVVPVPRGPKGRGFIVVLAGLAIPKNAPHQEEAWKL
IEYLTRPETQVKVMEKVGFFPTVKEASNAVPEGPLKILVNGVTAQSSTSDALIVMIPNLGEKGGEFSAIYRDAFTRIVLN
GEDPESVLKELGPKLHKLFEEVGVPEP

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47479; Mature: 47479

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKISMLLIVLLGIAVFASGCIGGGGAKIVWASTQLNPPEERAFVLNELIPPFKEETGI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC
DVEFVPLSYADLSTRLEAEMSSGEVTLDVVADLHGGLDYFNSKGWLTDLSGKIKELQGRT
CEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHCCCCCEECCCHHHHHHCCHH
FIESYLQYATDQNGKVFYVPWMSATYVMVVNKEAFKYLPEGLTQEDVMKGTEKWTYDALL
HHHHHHHHHCCCCCCEEEEECCCCEEEEEECHHHHHHHHCCCCHHHHHCCCCCCCHHHHH
EWLENIYKQTGKKAFGLPAGPKGLLHRFIHGYLYPSFTGYETKKFDSPEALEMWDYFKDL
HHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
WEYTNPASTTWDAMADPLLQGDVLIAWDHTARIKNAITTKPDQFVVVPVPRGPKGRGFIV
HHCCCCCCCCHHHHHCHHHCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCEEEE
VLAGLAIPKNAPHQEEAWKLIEYLTRPETQVKVMEKVGFFPTVKEASNAVPEGPLKILVN
EEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEEE
GVTAQSSTSDALIVMIPNLGEKGGEFSAIYRDAFTRIVLNGEDPESVLKELGPKLHKLFE
CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHCHHHHHHHH
EVGVPEP
HCCCCCC
>Mature Secondary Structure
MNKKISMLLIVLLGIAVFASGCIGGGGAKIVWASTQLNPPEERAFVLNELIPPFKEETGI
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC
DVEFVPLSYADLSTRLEAEMSSGEVTLDVVADLHGGLDYFNSKGWLTDLSGKIKELQGRT
CEEEEECCHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHCCCCCEECCCHHHHHHCCHH
FIESYLQYATDQNGKVFYVPWMSATYVMVVNKEAFKYLPEGLTQEDVMKGTEKWTYDALL
HHHHHHHHHCCCCCCEEEEECCCCEEEEEECHHHHHHHHCCCCHHHHHCCCCCCCHHHHH
EWLENIYKQTGKKAFGLPAGPKGLLHRFIHGYLYPSFTGYETKKFDSPEALEMWDYFKDL
HHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
WEYTNPASTTWDAMADPLLQGDVLIAWDHTARIKNAITTKPDQFVVVPVPRGPKGRGFIV
HHCCCCCCCCHHHHHCHHHCCCEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCEEEE
VLAGLAIPKNAPHQEEAWKLIEYLTRPETQVKVMEKVGFFPTVKEASNAVPEGPLKILVN
EEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEEE
GVTAQSSTSDALIVMIPNLGEKGGEFSAIYRDAFTRIVLNGEDPESVLKELGPKLHKLFE
CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEEEEECCCCHHHHHHHHCHHHHHHHH
EVGVPEP
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA