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The map label for this gene is ef1B

Identifier: 18978337

GI number: 18978337

Start: 1814430

End: 1814705

Strand: Direct

Name: ef1B

Synonym: PF1965

Alternate gene names: 18978337

Gene position: 1814430-1814705 (Clockwise)

Preceding gene: 18978336

Following gene: 18978339

Centisome position: 95.08

GC content: 42.39

Gene sequence:

>276_bases
ATGGGCGACTTTAATTTGGTTGGTGTAATTAGAGTGATGCCAACAGATCCCGAAGTGAACTTGGATGAGCTTGAGGAAAA
GTTGAAGGCACTAATTCCAGAGAAGTATGGACTTGCAAAGGTTGAAAGAGAACCCATAGCCTTTGGACTAGTAGCACTGA
AGTTCTACGTTCTTGGAAGGGACGAGGAAGGGTACTCCTTCGACGAAATAGCAGAAAAGTTCCAAGAAGTAGAAGAGGTA
GAAAGTGCAGAAGTTGAAACTGTCTCAAGAATTTAA

Upstream 100 bases:

>100_bases
CTGTCCAAACTGCGGTGAGGCAGTAATATGGAGATGTGAAAGCTGTAGGGTTTTAGCAAAGCCCTATAAGTGCCCCAATT
GCGGATGGGAGGGACCCTGA

Downstream 100 bases:

>100_bases
AGTGACAAATTGACCTTTGGCTTCTTTAGTTCATCTAAAAATTCCTTCATTTCTTCATTTTCAATTTTATTGTAAAGCTC
TTCAAATTCCTTTTTAGCTT

Product: elongation factor 1-beta

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MGDFNLVGVIRVMPTDPEVNLDELEEKLKALIPEKYGLAKVEREPIAFGLVALKFYVLGRDEEGYSFDEIAEKFQEVEEV
ESAEVETVSRI

Sequences:

>Translated_91_residues
MGDFNLVGVIRVMPTDPEVNLDELEEKLKALIPEKYGLAKVEREPIAFGLVALKFYVLGRDEEGYSFDEIAEKFQEVEEV
ESAEVETVSRI
>Mature_90_residues
GDFNLVGVIRVMPTDPEVNLDELEEKLKALIPEKYGLAKVEREPIAFGLVALKFYVLGRDEEGYSFDEIAEKFQEVEEVE
SAEVETVSRI

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EF1B_PYRFU (Q8TZM5)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579694.1
- ProteinModelPortal:   Q8TZM5
- SMR:   Q8TZM5
- EnsemblBacteria:   EBPYRT00000005852
- GeneID:   1469847
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1965
- NMPDR:   fig|186497.1.peg.2017
- GeneTree:   EBGT00050000023143
- HOGENOM:   HBG541037
- OMA:   VALKFYV
- ProtClustDB:   PRK00435
- HAMAP:   MF_00043
- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038
- Gene3D:   G3DSA:3.30.70.60
- PIRSF:   PIRSF006521
- SMART:   SM00888
- TIGRFAMs:   TIGR00489

Pfam domain/function: PF00736 EF1_GNE; SSF54984 Transl_elong_EF1B_B/D_G_exch

EC number: NA

Molecular weight: Translated: 10322; Mature: 10191

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDFNLVGVIRVMPTDPEVNLDELEEKLKALIPEKYGLAKVEREPIAFGLVALKFYVLGR
CCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
DEEGYSFDEIAEKFQEVEEVESAEVETVSRI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GDFNLVGVIRVMPTDPEVNLDELEEKLKALIPEKYGLAKVEREPIAFGLVALKFYVLGR
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
DEEGYSFDEIAEKFQEVEEVESAEVETVSRI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA