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The map label for this gene is 18978097

Identifier: 18978097

GI number: 18978097

Start: 1603150

End: 1604493

Strand: Direct

Name: 18978097

Synonym: PF1725

Alternate gene names: NA

Gene position: 1603150-1604493 (Clockwise)

Preceding gene: 18978096

Following gene: 18978100

Centisome position: 84.01

GC content: 38.91

Gene sequence:

>1344_bases
ATGAAAAGAAAGAAGACTGTGATCCACCAGTTGATTTCCGAAAAACAAAGATTTGAAAAAGCTAAAGAAGGTGGGAATAT
GGCAGCAAAAGATGATTTCGGAACGACAAAGTATATTATTCATGCTGAATTTGAGGCTAATGGGGTTGTCGAAAGACCAG
ATGTAGTGGGGGCAATTTTTGGTCAGACGGAAGGACTTCTTGGGGACGATTTAGATCTAAGAGAACTTCAAAAAACTGGA
AGAATAGGAAGAATCAAAGTTGAGGTACACACAAAGGCAGGCAAAACTTATGGAACAATTTTAGTACCCTCAAGCCTAGA
TAGAGTAGAAACTGCAATTATAGCAGCAGCCCTTGAAACCATAGATAGAGTAGGTCCTTGCGAAGCAAAAATAAGAGTGA
TAAAAATAGAGGATGTTAGAGCCACAAAAAGGAAGTATATAATCGAAAGGGCAAAAGAAATACTCGAAACACTCATGGAG
GAGGAGATCCCAGAAACACAAGAGCTAGTTGAGGAAGTTAGAAAGGCAGTAAGAGAAATGGAGCTTATCGAATATGGTCC
TGAGAAGTTACCCGCAGGACCCCATGTCCCATTTTCTGACTCAATAATAGTTGTTGAGGGCAGAGCAGATGTCCTTAATC
TCTTAAGGCACGGGATAAAGAACGCAATTGCTGTAGAAGGAACATCAATTCCTGAAACAATAATAAAACTAAGTAAGGAG
AGAATAGTAACAGCGTTTACCGATGGAGACAGAGGAGGAGAGCTAATTCTAAAAGAGCTCCTCCAAGTTGCTGATATAGA
CTACGTAGCCAGAGCTCCAGAAGGAAAAGAAGTTGAAGAGCTAACTAAAAAAGAAATTATAAAGGCGCTAAGAAGTAAGG
TCCCAGCGGACCAGTTATTAACGATTGTTCAACAAAGGAAAGAGCTTTTTGATAAGTTAGGAAGAGAAAGGAGAAGAGGC
GGGGCTCGAAAACAAGAATATACGAAGAAAGGAAGTTTAAACCCCCAACCGCAAGTTCACCCAAATGAAAAAATTGTAAA
GCCCCTAAAAGTACTAAAGCCAGACTACAAAGAATTTGAGGAATTCATCGAGAAGGTAAAGAACGACTCAATAGCTCTCC
TAATAGATGAAAATAAGAACATAATAAAAGAAGTGCCAATAAGAGACATGTTAAGTGCAATAGAAAGCTCAGAAAGTATA
TATGCTGTTGTGTTTAACGGAGTCATAACCCAAAGGTTAATTGATATAGTGAGCGAGAAAGGAGCAAAATACTTGATTGG
TGCAAGAAAAGCTAATGTAGTTAGAAGACCCATAACCCTTAAGATCATAACTTTCGCAGAATGA

Upstream 100 bases:

>100_bases
TCCAATTTATTGCCTCAAAGGACGCTAAGGGGATTGAAGATCTCTATGATTTGTGGGAGAGCCTGAGGCTCCGTTTCTGG
GCCCCTAAGGAGGGTGATTA

Downstream 100 bases:

>100_bases
GCTCTTTTTCTCTTGACTTCTATTTTTTGAAAAAGAAATAAAAAGTAAAAGTAGAAGAGGGCTTTAGATTTCTTCTTCAC
TTTGTGGAGCTATCTTTTCC

Product: DNA primase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MKRKKTVIHQLISEKQRFEKAKEGGNMAAKDDFGTTKYIIHAEFEANGVVERPDVVGAIFGQTEGLLGDDLDLRELQKTG
RIGRIKVEVHTKAGKTYGTILVPSSLDRVETAIIAAALETIDRVGPCEAKIRVIKIEDVRATKRKYIIERAKEILETLME
EEIPETQELVEEVRKAVREMELIEYGPEKLPAGPHVPFSDSIIVVEGRADVLNLLRHGIKNAIAVEGTSIPETIIKLSKE
RIVTAFTDGDRGGELILKELLQVADIDYVARAPEGKEVEELTKKEIIKALRSKVPADQLLTIVQQRKELFDKLGRERRRG
GARKQEYTKKGSLNPQPQVHPNEKIVKPLKVLKPDYKEFEEFIEKVKNDSIALLIDENKNIIKEVPIRDMLSAIESSESI
YAVVFNGVITQRLIDIVSEKGAKYLIGARKANVVRRPITLKIITFAE

Sequences:

>Translated_447_residues
MKRKKTVIHQLISEKQRFEKAKEGGNMAAKDDFGTTKYIIHAEFEANGVVERPDVVGAIFGQTEGLLGDDLDLRELQKTG
RIGRIKVEVHTKAGKTYGTILVPSSLDRVETAIIAAALETIDRVGPCEAKIRVIKIEDVRATKRKYIIERAKEILETLME
EEIPETQELVEEVRKAVREMELIEYGPEKLPAGPHVPFSDSIIVVEGRADVLNLLRHGIKNAIAVEGTSIPETIIKLSKE
RIVTAFTDGDRGGELILKELLQVADIDYVARAPEGKEVEELTKKEIIKALRSKVPADQLLTIVQQRKELFDKLGRERRRG
GARKQEYTKKGSLNPQPQVHPNEKIVKPLKVLKPDYKEFEEFIEKVKNDSIALLIDENKNIIKEVPIRDMLSAIESSESI
YAVVFNGVITQRLIDIVSEKGAKYLIGARKANVVRRPITLKIITFAE
>Mature_447_residues
MKRKKTVIHQLISEKQRFEKAKEGGNMAAKDDFGTTKYIIHAEFEANGVVERPDVVGAIFGQTEGLLGDDLDLRELQKTG
RIGRIKVEVHTKAGKTYGTILVPSSLDRVETAIIAAALETIDRVGPCEAKIRVIKIEDVRATKRKYIIERAKEILETLME
EEIPETQELVEEVRKAVREMELIEYGPEKLPAGPHVPFSDSIIVVEGRADVLNLLRHGIKNAIAVEGTSIPETIIKLSKE
RIVTAFTDGDRGGELILKELLQVADIDYVARAPEGKEVEELTKKEIIKALRSKVPADQLLTIVQQRKELFDKLGRERRRG
GARKQEYTKKGSLNPQPQVHPNEKIVKPLKVLKPDYKEFEEFIEKVKNDSIALLIDENKNIIKEVPIRDMLSAIESSESI
YAVVFNGVITQRLIDIVSEKGAKYLIGARKANVVRRPITLKIITFAE

Specific function: Unknown

COG id: COG0358

COG function: function code L; DNA primase (bacterial type)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1725_PYRFU (Q8U076)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579454.1
- ProteinModelPortal:   Q8U076
- SMR:   Q8U076
- EnsemblBacteria:   EBPYRT00000005859
- GeneID:   1469602
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1725
- NMPDR:   fig|186497.1.peg.1773
- GeneTree:   EBGT00050000022542
- HOGENOM:   HBG541216
- OMA:   EMELIEY
- ProtClustDB:   PRK04031
- HAMAP:   MF_00007
- InterPro:   IPR006171
- InterPro:   IPR020607
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 50259; Mature: 50259

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKKTVIHQLISEKQRFEKAKEGGNMAAKDDFGTTKYIIHAEFEANGVVERPDVVGAIF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHH
GQTEGLLGDDLDLRELQKTGRIGRIKVEVHTKAGKTYGTILVPSSLDRVETAIIAAALET
CCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHH
IDRVGPCEAKIRVIKIEDVRATKRKYIIERAKEILETLMEEEIPETQELVEEVRKAVREM
HHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ELIEYGPEKLPAGPHVPFSDSIIVVEGRADVLNLLRHGIKNAIAVEGTSIPETIIKLSKE
HHHHCCHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
RIVTAFTDGDRGGELILKELLQVADIDYVARAPEGKEVEELTKKEIIKALRSKVPADQLL
HEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
TIVQQRKELFDKLGRERRRGGARKQEYTKKGSLNPQPQVHPNEKIVKPLKVLKPDYKEFE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
EFIEKVKNDSIALLIDENKNIIKEVPIRDMLSAIESSESIYAVVFNGVITQRLIDIVSEK
HHHHHHCCCCEEEEECCCCCHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC
GAKYLIGARKANVVRRPITLKIITFAE
CCEEEEECHHHHHHCCCEEEEEEEECC
>Mature Secondary Structure
MKRKKTVIHQLISEKQRFEKAKEGGNMAAKDDFGTTKYIIHAEFEANGVVERPDVVGAIF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHH
GQTEGLLGDDLDLRELQKTGRIGRIKVEVHTKAGKTYGTILVPSSLDRVETAIIAAALET
CCCCCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHH
IDRVGPCEAKIRVIKIEDVRATKRKYIIERAKEILETLMEEEIPETQELVEEVRKAVREM
HHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ELIEYGPEKLPAGPHVPFSDSIIVVEGRADVLNLLRHGIKNAIAVEGTSIPETIIKLSKE
HHHHCCHHHCCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHH
RIVTAFTDGDRGGELILKELLQVADIDYVARAPEGKEVEELTKKEIIKALRSKVPADQLL
HEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
TIVQQRKELFDKLGRERRRGGARKQEYTKKGSLNPQPQVHPNEKIVKPLKVLKPDYKEFE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHH
EFIEKVKNDSIALLIDENKNIIKEVPIRDMLSAIESSESIYAVVFNGVITQRLIDIVSEK
HHHHHHCCCCEEEEECCCCCHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC
GAKYLIGARKANVVRRPITLKIITFAE
CCEEEEECHHHHHHCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA