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The map label for this gene is 18978096

Identifier: 18978096

GI number: 18978096

Start: 1602755

End: 1603150

Strand: Direct

Name: 18978096

Synonym: PF1724

Alternate gene names: NA

Gene position: 1602755-1603150 (Clockwise)

Preceding gene: 18978095

Following gene: 18978097

Centisome position: 83.99

GC content: 43.94

Gene sequence:

>396_bases
ATGTATCCCGAAAACTATGAAAAGTTTGAAAAAATAATTGAAAGGTTGCGAGAATTCAAGGGGGTTATAATAGTAGAGGG
AAAGCGAGATGAAGATTCCCTACGCAAATTGGGGGTCCAAACGGAGATCCTCAGGCTCTCCCGATCATCCCTTGCAGATG
TAGCGTTACTAGCCTCTGAACATGAAGAAGTAATGATCCTAACAGATTTCGACGAAACTGGAGAGAAACTCGCAAAAAGG
CTCTACGACCTCTTAGTAGGTCTAACAAAAGTCGATATGGAAACTAGAAGGGAACTCCAATTTATTGCCTCAAAGGACGC
TAAGGGGATTGAAGATCTCTATGATTTGTGGGAGAGCCTGAGGCTCCGTTTCTGGGCCCCTAAGGAGGGTGATTAA

Upstream 100 bases:

>100_bases
TTAGCTATGTGGGAAAAGTGAAAGAAATTTGCTAAATAGTTAAAGGCCCAGGCCCAAAAATTTATAACTCTAAACTTCGC
TCAAAATATCCGATAGTTAT

Downstream 100 bases:

>100_bases
TGAAAAGAAAGAAGACTGTGATCCACCAGTTGATTTCCGAAAAACAAAGATTTGAAAAAGCTAAAGAAGGTGGGAATATG
GCAGCAAAAGATGATTTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MYPENYEKFEKIIERLREFKGVIIVEGKRDEDSLRKLGVQTEILRLSRSSLADVALLASEHEEVMILTDFDETGEKLAKR
LYDLLVGLTKVDMETRRELQFIASKDAKGIEDLYDLWESLRLRFWAPKEGD

Sequences:

>Translated_131_residues
MYPENYEKFEKIIERLREFKGVIIVEGKRDEDSLRKLGVQTEILRLSRSSLADVALLASEHEEVMILTDFDETGEKLAKR
LYDLLVGLTKVDMETRRELQFIASKDAKGIEDLYDLWESLRLRFWAPKEGD
>Mature_131_residues
MYPENYEKFEKIIERLREFKGVIIVEGKRDEDSLRKLGVQTEILRLSRSSLADVALLASEHEEVMILTDFDETGEKLAKR
LYDLLVGLTKVDMETRRELQFIASKDAKGIEDLYDLWESLRLRFWAPKEGD

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1724_PYRFU (Q8U077)

Other databases:

- EMBL:   AE009950
- RefSeq:   NP_579453.1
- ProteinModelPortal:   Q8U077
- SMR:   Q8U077
- EnsemblBacteria:   EBPYRT00000005918
- GeneID:   1469601
- GenomeReviews:   AE009950_GR
- KEGG:   pfu:PF1724
- NMPDR:   fig|186497.1.peg.1772
- GeneTree:   EBGT00050000023375
- HOGENOM:   HBG726878
- OMA:   ASEHEEV
- ProtClustDB:   PRK04017
- HAMAP:   MF_01095
- InterPro:   IPR006171
- InterPro:   IPR022972
- SMART:   SM00493

Pfam domain/function: PF01751 Toprim

EC number: NA

Molecular weight: Translated: 15354; Mature: 15354

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPENYEKFEKIIERLREFKGVIIVEGKRDEDSLRKLGVQTEILRLSRSSLADVALLASE
CCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
HEEVMILTDFDETGEKLAKRLYDLLVGLTKVDMETRRELQFIASKDAKGIEDLYDLWESL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RLRFWAPKEGD
HEEECCCCCCC
>Mature Secondary Structure
MYPENYEKFEKIIERLREFKGVIIVEGKRDEDSLRKLGVQTEILRLSRSSLADVALLASE
CCCCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHCC
HEEVMILTDFDETGEKLAKRLYDLLVGLTKVDMETRRELQFIASKDAKGIEDLYDLWESL
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RLRFWAPKEGD
HEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA