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The map label for this gene is dppC [H]

Identifier: 18977583

GI number: 18977583

Start: 1152639

End: 1153571

Strand: Direct

Name: dppC [H]

Synonym: PF1211

Alternate gene names: 18977583

Gene position: 1152639-1153571 (Clockwise)

Preceding gene: 18977582

Following gene: 18977584

Centisome position: 60.4

GC content: 46.2

Gene sequence:

>933_bases
ATGCCAGTTGGAAAATCAAAGTTTGAAGTCCTCAAAATCGCGCTAAAAAACATAAAGTTTAAAGTTGGGCTTGGAATCGT
CATATTCTTTGCCCTATTCGCGATCATCGGCCCATTATTAGTCCCCTTTGACAACATGGGCTATTACCCAATAAAGGTTG
GGGATAGAGTGATACCAAAGCCAACAGAACCAGCCCTACCCCCTGGGAGCTTATCCAAAGTCTTCACCCCAAACGGAACA
GTTGAGGTTAAGCACTACCTGGGAACTGACAGCTTCGGAAGGGACGTCTACGCTCAACTGACATATGGTTTGAGGTCTTC
ACTAATAGTAGGACTGCTCGCGGGCAGTATAGCTACGGCAATCGGTCTCCTAATAGGTTTCATAGCGGGATACAAGGGAG
GGCTGGTGGATGAGATACTAATGATGATCACGAACATAATGCTTGTAATCCCAACAATGGCTCTACTGATCATAATCGCA
GCCTACCTCCCCTACAGAGGTATAGGAATTGAGAGCGTTATTATCGGTCTAACAGCCTGGCCTTGGACTGCCAGAGCTGT
TAGAGCTCAAACTTTGTCGCTGAAAAGGAGAGAGTTCGTTGATCTATCAAAGCTAAGCGGTCAAAGTGATCTACAGATAA
TCTTCGGAGAGATACTTCCGAACATGGTGTCTTACGTCTTCATGGTCTTCATACTTCAGTTCAGTGGAGCAATATTAGCT
GCTGTAGGTCTTGACTTCCTTGGCCTTGGACCAACTAAGGGAATGTCCTTAGGAATAATGCTCCAGATGGCGGTGTTGTG
GAATGCAATAAACCTCGGCTACTGGTGGTGGGCAATTCCCCCAGGATTGGTCATAGCCATCCTAATTACCGGGCTATATA
TGATCAATCTTGGTCTTGAGGAGGTGTTTAATCCGAGGTTGAGGAGGGAGTGA

Upstream 100 bases:

>100_bases
GTTATAATCCTAACGGTCCTAGCTGCCAACTTCATAATAGACATAATGTACGCCCTAATCGATCCAAGAATAAAGGCCGC
CTACGTGGAGGGATGAAGAA

Downstream 100 bases:

>100_bases
GATGCTTAAGGTTGAGAACCTCAAGATTTACTATTCAACCCCAATCGGATTTGTAAAAGCAGTTGATGGAGTAAGTTTCG
AAGTCAAGAAGGGGGAAGTG

Product: dipeptide ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPVGKSKFEVLKIALKNIKFKVGLGIVIFFALFAIIGPLLVPFDNMGYYPIKVGDRVIPKPTEPALPPGSLSKVFTPNGT
VEVKHYLGTDSFGRDVYAQLTYGLRSSLIVGLLAGSIATAIGLLIGFIAGYKGGLVDEILMMITNIMLVIPTMALLIIIA
AYLPYRGIGIESVIIGLTAWPWTARAVRAQTLSLKRREFVDLSKLSGQSDLQIIFGEILPNMVSYVFMVFILQFSGAILA
AVGLDFLGLGPTKGMSLGIMLQMAVLWNAINLGYWWWAIPPGLVIAILITGLYMINLGLEEVFNPRLRRE

Sequences:

>Translated_310_residues
MPVGKSKFEVLKIALKNIKFKVGLGIVIFFALFAIIGPLLVPFDNMGYYPIKVGDRVIPKPTEPALPPGSLSKVFTPNGT
VEVKHYLGTDSFGRDVYAQLTYGLRSSLIVGLLAGSIATAIGLLIGFIAGYKGGLVDEILMMITNIMLVIPTMALLIIIA
AYLPYRGIGIESVIIGLTAWPWTARAVRAQTLSLKRREFVDLSKLSGQSDLQIIFGEILPNMVSYVFMVFILQFSGAILA
AVGLDFLGLGPTKGMSLGIMLQMAVLWNAINLGYWWWAIPPGLVIAILITGLYMINLGLEEVFNPRLRRE
>Mature_309_residues
PVGKSKFEVLKIALKNIKFKVGLGIVIFFALFAIIGPLLVPFDNMGYYPIKVGDRVIPKPTEPALPPGSLSKVFTPNGTV
EVKHYLGTDSFGRDVYAQLTYGLRSSLIVGLLAGSIATAIGLLIGFIAGYKGGLVDEILMMITNIMLVIPTMALLIIIAA
YLPYRGIGIESVIIGLTAWPWTARAVRAQTLSLKRREFVDLSKLSGQSDLQIIFGEILPNMVSYVFMVFILQFSGAILAA
VGLDFLGLGPTKGMSLGIMLQMAVLWNAINLGYWWWAIPPGLVIAILITGLYMINLGLEEVFNPRLRRE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=236, Percent_Identity=33.0508474576271, Blast_Score=114, Evalue=9e-27,
Organism=Escherichia coli, GI1789964, Length=233, Percent_Identity=34.3347639484979, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=29.9180327868852, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787760, Length=230, Percent_Identity=30.8695652173913, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1787498, Length=229, Percent_Identity=34.4978165938865, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788505, Length=318, Percent_Identity=27.6729559748428, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787549, Length=188, Percent_Identity=30.8510638297872, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33835; Mature: 33704

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVGKSKFEVLKIALKNIKFKVGLGIVIFFALFAIIGPLLVPFDNMGYYPIKVGDRVIPK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCC
PTEPALPPGSLSKVFTPNGTVEVKHYLGTDSFGRDVYAQLTYGLRSSLIVGLLAGSIATA
CCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLLIGFIAGYKGGLVDEILMMITNIMLVIPTMALLIIIAAYLPYRGIGIESVIIGLTAW
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
PWTARAVRAQTLSLKRREFVDLSKLSGQSDLQIIFGEILPNMVSYVFMVFILQFSGAILA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGLDFLGLGPTKGMSLGIMLQMAVLWNAINLGYWWWAIPPGLVIAILITGLYMINLGLE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCHH
EVFNPRLRRE
HHCCCHHCCC
>Mature Secondary Structure 
PVGKSKFEVLKIALKNIKFKVGLGIVIFFALFAIIGPLLVPFDNMGYYPIKVGDRVIPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEECCC
PTEPALPPGSLSKVFTPNGTVEVKHYLGTDSFGRDVYAQLTYGLRSSLIVGLLAGSIATA
CCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGLLIGFIAGYKGGLVDEILMMITNIMLVIPTMALLIIIAAYLPYRGIGIESVIIGLTAW
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
PWTARAVRAQTLSLKRREFVDLSKLSGQSDLQIIFGEILPNMVSYVFMVFILQFSGAILA
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGLDFLGLGPTKGMSLGIMLQMAVLWNAINLGYWWWAIPPGLVIAILITGLYMINLGLE
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCHH
EVFNPRLRRE
HHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]