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The map label for this gene is rpl21e [H]

Identifier: 18977407

GI number: 18977407

Start: 990790

End: 991083

Strand: Direct

Name: rpl21e [H]

Synonym: PF1035

Alternate gene names: 18977407

Gene position: 990790-991083 (Clockwise)

Preceding gene: 18977402

Following gene: 18977408

Centisome position: 51.92

GC content: 44.22

Gene sequence:

>294_bases
ATGGTTCAAAAGGCTCACAGCTTTAGGAGAAAAACTAGGAAGAAGCTTAGTAAACATCCTAGAAGGAGAGGGCTTCCACC
TCTAACTAGATTTCTCCAAGAGTTTGAAGTAGGACAGAGAGTTCATATTGTTATAGAGCCCAGTTATCACAAAGGAATGC
CAGATCCAAGATTTCACGGAAGAACTGGGACAGTGGTGGGGAAGAGGGGAGAAGCCTACATCGTGGAAATTAAAGACGGG
AGCAAGGTAAAGACGCTCTTCATTCATCCAGTACATCTCAGACCACAGAAGTGA

Upstream 100 bases:

>100_bases
CTTTCAACATGGGTGAAGGGTAAGGGGGTAAGCACCGTCTCTAAGATATGGTTTTGTCTAATCTAATTTCCTAAAATTTG
TTAATAGGAGGGTGGTAAAT

Downstream 100 bases:

>100_bases
CGGGCTATGATAGGGAGAGGCAAACTCGGGGAAAAGTACATAACGATAGCTGAAGCAAAGGAATTATTACTAAAAAGGCG
CGAAGAAGAAGTAAAAGCTG

Product: 50S ribosomal protein L21e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MVQKAHSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTVVGKRGEAYIVEIKDG
SKVKTLFIHPVHLRPQK

Sequences:

>Translated_97_residues
MVQKAHSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTVVGKRGEAYIVEIKDG
SKVKTLFIHPVHLRPQK
>Mature_97_residues
MVQKAHSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTVVGKRGEAYIVEIKDG
SKVKTLFIHPVHLRPQK

Specific function: Unknown

COG id: COG2139

COG function: function code J; Ribosomal protein L21E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L21e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001147
- InterPro:   IPR022856
- InterPro:   IPR018259
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01157 Ribosomal_L21e [H]

EC number: NA

Molecular weight: Translated: 11342; Mature: 11342

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: PS01171 RIBOSOMAL_L21E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQKAHSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHG
CCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCC
RTGTVVGKRGEAYIVEIKDGSKVKTLFIHPVHLRPQK
CCCCEEECCCCEEEEEECCCCEEEEEEEEEEECCCCC
>Mature Secondary Structure
MVQKAHSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHG
CCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCC
RTGTVVGKRGEAYIVEIKDGSKVKTLFIHPVHLRPQK
CCCCEEECCCCEEEEEECCCCEEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA