| Definition | Pyrococcus furiosus DSM 3638, complete genome. |
|---|---|
| Accession | NC_003413 |
| Length | 1,908,256 |
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The map label for this gene is pstS [H]
Identifier: 18977375
GI number: 18977375
Start: 960123
End: 961250
Strand: Direct
Name: pstS [H]
Synonym: PF1003
Alternate gene names: 18977375
Gene position: 960123-961250 (Clockwise)
Preceding gene: 18977374
Following gene: 18977376
Centisome position: 50.31
GC content: 42.73
Gene sequence:
>1128_bases GTGAAGAGGCTAGCAACAATATTTATTATTTTTGCCTTGGGGCTTTCCTTAGTGGCAAGCGGTTGTATATCCGAGGGAAA TGCATCCAATGTCCCTCAAGCAACTTCTAAAACTGAGATAATAACGATTCGCACAACAGGTGCAACTTTTCCCCAATATC AGCTCCAAAAGTGGATTAGCATATATACAAAAAAGAACCCAAACGTTAAGATCGAGTATGAAGGTGGTGGAAGTGGGCAT GGTCAAGAAGCATTTCTAAAGGGCCTTACAGATATAGGAAGAACAGACCCCCCAGTTAAAGAATCCACGTGGAAAAAGTT CCTTGAAACTGGTGATCAGCCCCTTCAGTTTCCTATAGTTGTCGGTGCTGTAGTCGTCGTTCACAATATTCCAAATGTTG ATGAGCTAAAGCTCGATGGAGAGACCTTAGCGAAAATCTTTATGGGCCAAATAGAGTATTGGGATGATCCAGCAATAAAG TCCCTTAATCCTAATGTAAACCTTCCTCACGAAAAAATAATAGTAATTCATAGGAGTGATTCGAGTGGAACCACTGCAAT TTTTACCACTTACTTGAGCTTAGTCAGTGAAGAATGGGCCACAAAAGTAGGAGCCGGAAAGACTGTGGATTGGCCAGTTG ACAAAGTTGGAAGGGGAATTGGTGCAAAAGGCAACCCAGGAGTTGTTCAGGCCTTAAAGAACACCCCATATAGTATAGCA TACACTGAGCTATCTTTTGCAATAGAGGAAAATCTCAAGATAGTAGCACTCAAAAACAAAGCCGGAAACTTCGTCAAACC TACCGAGGAGACAATAAAAGCTGCAGTAGCCGCAGTTAAGGCCTTTATACCCGATCCCGCTGAGGGGTATAAAGAGGATA TTAGGCAACTTCTCAATGCTCCCGGAGAAAATTCATACCCGATAGTTGCTTTTACACACTTTCTCGTCTGGCAGAATAAG GGAGGAAAGCACTACAGTAAAGAGAAGGCTCAAGCGATTAAGGACTTTCTTAGATGGGTTTTAACAGAGGGACAGAAACC AGAGAATATTGCTCCAGGCTACGTAGGTCTCCCACCTGAAGTTGCCGAAATAGGTCTTAAGGCAGTTGAGATGATAGAAA CAGGTTAA
Upstream 100 bases:
>100_bases AAATAGAGAATATATATCTATATAGATTCTTTGTTCAGATATGTTTTATTTCGACAATGCTTATATTTTCTGAATTTTCT CTATTTCTTGGTGATGTATC
Downstream 100 bases:
>100_bases AGGAGGTGAAAAAATGAAGAAAATAACTATTAGTAGTTTGCTTCTACTTTTACTTATTTCTACCAATTTGAATCTCGCAT ACGATTCCCAAGAGAGCGGT
Product: phosphate-binding periplasmic protein precursor
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKRLATIFIIFALGLSLVASGCISEGNASNVPQATSKTEIITIRTTGATFPQYQLQKWISIYTKKNPNVKIEYEGGGSGH GQEAFLKGLTDIGRTDPPVKESTWKKFLETGDQPLQFPIVVGAVVVVHNIPNVDELKLDGETLAKIFMGQIEYWDDPAIK SLNPNVNLPHEKIIVIHRSDSSGTTAIFTTYLSLVSEEWATKVGAGKTVDWPVDKVGRGIGAKGNPGVVQALKNTPYSIA YTELSFAIEENLKIVALKNKAGNFVKPTEETIKAAVAAVKAFIPDPAEGYKEDIRQLLNAPGENSYPIVAFTHFLVWQNK GGKHYSKEKAQAIKDFLRWVLTEGQKPENIAPGYVGLPPEVAEIGLKAVEMIETG
Sequences:
>Translated_375_residues MKRLATIFIIFALGLSLVASGCISEGNASNVPQATSKTEIITIRTTGATFPQYQLQKWISIYTKKNPNVKIEYEGGGSGH GQEAFLKGLTDIGRTDPPVKESTWKKFLETGDQPLQFPIVVGAVVVVHNIPNVDELKLDGETLAKIFMGQIEYWDDPAIK SLNPNVNLPHEKIIVIHRSDSSGTTAIFTTYLSLVSEEWATKVGAGKTVDWPVDKVGRGIGAKGNPGVVQALKNTPYSIA YTELSFAIEENLKIVALKNKAGNFVKPTEETIKAAVAAVKAFIPDPAEGYKEDIRQLLNAPGENSYPIVAFTHFLVWQNK GGKHYSKEKAQAIKDFLRWVLTEGQKPENIAPGYVGLPPEVAEIGLKAVEMIETG >Mature_375_residues MKRLATIFIIFALGLSLVASGCISEGNASNVPQATSKTEIITIRTTGATFPQYQLQKWISIYTKKNPNVKIEYEGGGSGH GQEAFLKGLTDIGRTDPPVKESTWKKFLETGDQPLQFPIVVGAVVVVHNIPNVDELKLDGETLAKIFMGQIEYWDDPAIK SLNPNVNLPHEKIIVIHRSDSSGTTAIFTTYLSLVSEEWATKVGAGKTVDWPVDKVGRGIGAKGNPGVVQALKNTPYSIA YTELSFAIEENLKIVALKNKAGNFVKPTEETIKAAVAAVKAFIPDPAEGYKEDIRQLLNAPGENSYPIVAFTHFLVWQNK GGKHYSKEKAQAIKDFLRWVLTEGQKPENIAPGYVGLPPEVAEIGLKAVEMIETG
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=324, Percent_Identity=35.8024691358025, Blast_Score=189, Evalue=3e-49,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 40888; Mature: 40888
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLATIFIIFALGLSLVASGCISEGNASNVPQATSKTEIITIRTTGATFPQYQLQKWIS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH IYTKKNPNVKIEYEGGGSGHGQEAFLKGLTDIGRTDPPVKESTWKKFLETGDQPLQFPIV HHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEHHHH VGAVVVVHNIPNVDELKLDGETLAKIFMGQIEYWDDPAIKSLNPNVNLPHEKIIVIHRSD HHHHHHHHCCCCCHHEEECHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEEECC SSGTTAIFTTYLSLVSEEWATKVGAGKTVDWPVDKVGRGIGAKGNPGVVQALKNTPYSIA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEE YTELSFAIEENLKIVALKNKAGNFVKPTEETIKAAVAAVKAFIPDPAEGYKEDIRQLLNA EHHHHEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC PGENSYPIVAFTHFLVWQNKGGKHYSKEKAQAIKDFLRWVLTEGQKPENIAPGYVGLPPE CCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH VAEIGLKAVEMIETG HHHHHHHHHHHHHCC >Mature Secondary Structure MKRLATIFIIFALGLSLVASGCISEGNASNVPQATSKTEIITIRTTGATFPQYQLQKWIS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHH IYTKKNPNVKIEYEGGGSGHGQEAFLKGLTDIGRTDPPVKESTWKKFLETGDQPLQFPIV HHCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEHHHH VGAVVVVHNIPNVDELKLDGETLAKIFMGQIEYWDDPAIKSLNPNVNLPHEKIIVIHRSD HHHHHHHHCCCCCHHEEECHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEEEEEEECC SSGTTAIFTTYLSLVSEEWATKVGAGKTVDWPVDKVGRGIGAKGNPGVVQALKNTPYSIA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHCCCCEEE YTELSFAIEENLKIVALKNKAGNFVKPTEETIKAAVAAVKAFIPDPAEGYKEDIRQLLNA EHHHHEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC PGENSYPIVAFTHFLVWQNKGGKHYSKEKAQAIKDFLRWVLTEGQKPENIAPGYVGLPPE CCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH VAEIGLKAVEMIETG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]