| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311568
Identifier: 18311568
GI number: 18311568
Start: 2962484
End: 2963272
Strand: Reverse
Name: 18311568
Synonym: CPE2586
Alternate gene names: NA
Gene position: 2963272-2962484 (Counterclockwise)
Preceding gene: 18311571
Following gene: 161485638
Centisome position: 97.75
GC content: 27.25
Gene sequence:
>789_bases ATGTTTGATCCTAAAATGTTAAGCGTTGAATTTAGAAATGGAATTACAGATGAAAAACCAATAGAGGGAAGAAAGTACAC ATTAACTCATAATGATGATACTGGAGAGTTATTTCTTACAGTAGCTTTAGCATATGCTTATGACAAAATAAACTCATCAG CGAGAGATGAAGTTTTTGGAGTTTGGAAAAGAGGAAACAATAGATTTATCTTAAAAATATACTTATATGTTGATGGAAAT CAAGGAAGAGAAGAGGCCATAAAGAGAGATAGAATATTTAGAAAAGAGTTACCTTTAGCACTAGCTGCTATAGCATATGG AGATAGAAAGTTTTTAGATGATAATGATGATTTATTAAATAGCAATATAATAGTGAGATTTATATCTGCTTATGAAGAGC TTAATAAGATTGAAAACTATGGAACACTTAAGGATTATATTAATAATCGCATGGAAAATACACCAAACAATAATAACAAT ATTTATATGGAAGAGAGTATTTTAAATGATAATGATCCTTTAGTAAATAATTTTATAATCACTTTATTAAATCCATATAT TAAAGCTGAAATAACAAAGTTATATAAAAGTGATATGTATTATTGTTTAAAAGATGTGGAAGTATTAGAGGTATTTAAAG CTAAGCAAGATAATGAGTGTGAATTTAACTATAAGATTTATGTTGGAGTTAAGGTAGGAACTATGCAACCTGCATATAAT AACCTTATAATTGAGTTTTTAGTAACTCCAAATGCAGTAAGCACTTTAAGTGTAAAAAATCCAAGATAA
Upstream 100 bases:
>100_bases TTTTATCAGTAACATATATATATTTCATCAGATTAGTTATAGAAATAGTTAAAATTTCATATAATGAATAGCTAATATTA TATTTTTGAGGTGTTAAGTT
Downstream 100 bases:
>100_bases ATAAAAAAGAGATTGTTTTAAACAATCTCTTTTACTTTTTAGAACAATAAGTGTGCTATAAGTGCTATAACTGGTAGAGT AACTAATGTTCTCATTAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MFDPKMLSVEFRNGITDEKPIEGRKYTLTHNDDTGELFLTVALAYAYDKINSSARDEVFGVWKRGNNRFILKIYLYVDGN QGREEAIKRDRIFRKELPLALAAIAYGDRKFLDDNDDLLNSNIIVRFISAYEELNKIENYGTLKDYINNRMENTPNNNNN IYMEESILNDNDPLVNNFIITLLNPYIKAEITKLYKSDMYYCLKDVEVLEVFKAKQDNECEFNYKIYVGVKVGTMQPAYN NLIIEFLVTPNAVSTLSVKNPR
Sequences:
>Translated_262_residues MFDPKMLSVEFRNGITDEKPIEGRKYTLTHNDDTGELFLTVALAYAYDKINSSARDEVFGVWKRGNNRFILKIYLYVDGN QGREEAIKRDRIFRKELPLALAAIAYGDRKFLDDNDDLLNSNIIVRFISAYEELNKIENYGTLKDYINNRMENTPNNNNN IYMEESILNDNDPLVNNFIITLLNPYIKAEITKLYKSDMYYCLKDVEVLEVFKAKQDNECEFNYKIYVGVKVGTMQPAYN NLIIEFLVTPNAVSTLSVKNPR >Mature_262_residues MFDPKMLSVEFRNGITDEKPIEGRKYTLTHNDDTGELFLTVALAYAYDKINSSARDEVFGVWKRGNNRFILKIYLYVDGN QGREEAIKRDRIFRKELPLALAAIAYGDRKFLDDNDDLLNSNIIVRFISAYEELNKIENYGTLKDYINNRMENTPNNNNN IYMEESILNDNDPLVNNFIITLLNPYIKAEITKLYKSDMYYCLKDVEVLEVFKAKQDNECEFNYKIYVGVKVGTMQPAYN NLIIEFLVTPNAVSTLSVKNPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30444; Mature: 30444
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDPKMLSVEFRNGITDEKPIEGRKYTLTHNDDTGELFLTVALAYAYDKINSSARDEVFG CCCCCEEEEEHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHEE VWKRGNNRFILKIYLYVDGNQGREEAIKRDRIFRKELPLALAAIAYGDRKFLDDNDDLLN EEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHEEHHCCCCCCCCCCCCCHHC SNIIVRFISAYEELNKIENYGTLKDYINNRMENTPNNNNNIYMEESILNDNDPLVNNFII CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHH TLLNPYIKAEITKLYKSDMYYCLKDVEVLEVFKAKQDNECEFNYKIYVGVKVGTMQPAYN HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHH NLIIEFLVTPNAVSTLSVKNPR CEEEEEEECCCCEEEEEECCCC >Mature Secondary Structure MFDPKMLSVEFRNGITDEKPIEGRKYTLTHNDDTGELFLTVALAYAYDKINSSARDEVFG CCCCCEEEEEHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHEE VWKRGNNRFILKIYLYVDGNQGREEAIKRDRIFRKELPLALAAIAYGDRKFLDDNDDLLN EEECCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHEEHHCCCCCCCCCCCCCHHC SNIIVRFISAYEELNKIENYGTLKDYINNRMENTPNNNNNIYMEESILNDNDPLVNNFII CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHH TLLNPYIKAEITKLYKSDMYYCLKDVEVLEVFKAKQDNECEFNYKIYVGVKVGTMQPAYN HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHH NLIIEFLVTPNAVSTLSVKNPR CEEEEEEECCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA