| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is hcp
Identifier: 161485638
GI number: 161485638
Start: 2959142
End: 2960785
Strand: Reverse
Name: hcp
Synonym: CPE2584
Alternate gene names: 161485638
Gene position: 2960785-2959142 (Counterclockwise)
Preceding gene: 18311568
Following gene: 18311563
Centisome position: 97.67
GC content: 32.12
Gene sequence:
>1644_bases ATGTTTTGTTTTCAATGTCAAGAAACAGCAGGATGCAAAGGCTGTACTGTAAGAGGAGTTTGTGGAAAAACTGAAGATGT AGCAAAAATACAAGACCTTTTAATTTTTGTTACTAAAGGATTAGCTACAGTAGCTAATGAAGGAAGAAAAGTAGGGATAG TAGATAAAAAAGTAAACAGAATGATAATAGATAACTTATTTATTACTATTACTAATGCAAACTTTGATTTTAAAGCAATA GAAAAAAGAGTTAAAGATACTTTAGTAGCAAGAGAAGAATTAAAAGAAAGAGTACAAGCTAAGGGTGGAAATCCAATTGG ATCAGACTTCAAAGGATGTGCAACTTGGACTGCTACAACTAGTGAAGAAATGATGGAAAAAGCTTCACAAGTAGGAGTTT TAGCTACAGAAAATGAAGATATAAGAAGCTTAAGAGAACTTATTATGTATGGATTAAAAGGATTAGCAGCATACATGGAG CATGCTATGAATTTAGGACATGATAAAGAAGAAGTTCATGCATTTATGGCAGAAACTTTAGTTAAAATATTAGATGATTC ATTAAGCGCAGATGAATTAACTGCTTTAGCATTAGAAACAGGAAAATTCGGTGTTGATGGAATGGCATTATTAGATGAAG CTAACACTTCAACTTATGGTCATCCAGAAATAACAAAAGTTAATATAGGAGTTAGAAATAACCCAGGAATATTAATATCA GGACATGATTTAAAAGACTTAGAAATGTTATTAGAACAAACAGAAGGAACTGGAGTAGATGTTTATACTCATGGTGAAAT GTTACCAGGACACTATTATCCAAAATTCAAGAAATATGCTCACTTTGCAGGAAACTATGGTAATGCATGGTGGTTACAAA ATAAAGAGTTCGCATCATTTAATGGACCAATATTAATGACAACAAACTGTATAACACCAGTTCAAGATTCATATAGAGGA AGAATATTTACAACAGGCGCTGTAGGATATGAAGGATGTATTCATATAACAGCAGATGAAAATGGATACAAAGATTTCTC ACAAATAATAGAGTTAGCTAAGACTTGCAAAGCTCCAACAGAGATTGAAACAGGAGAAATCGTAGGTGGATTTGCTCATA ATCAAGTACTTGCTTTAGCTGACCAAGTAGTTGATGCTGTTAAATCAGGTGCAATAAGAAGATTCTTCGTAATGGCTGGG TGTGATGGAAGAGCTAAATCAAGAGATTACTATAGAGAATTTGCTGAAAAATTACCAAAGGACACTGTTATATTAACAGC TGGATGTGCTAAATATAAATATAATAAGTTACCACTTGGAGATATCAATGGAATTCCAAGAGTTTTAGATGCAGGACAAT GTAATGATTCATACTCATTAGTTGTAATAGCTTTAAAACTTGCTGAAGTATTTGGAACAGATAGTGTAAATGAATTACCA ATAAGCTACAACATAGCATGGTATGAACAAAAAGCTGTAATAGTATTATTATCATTATTACACTTAGGTGTTAAAAACAT TCATTTAGGACCAACTTTACCAGCATTCTTATCACCAAACGTAGCTAAAGTTTTAGTTGAAAACTTTGGAATTGGTGGAA TTACAAATGTAGAAGATGATATGAAAATGTTCTTAGGAGAATAA
Upstream 100 bases:
>100_bases AATCGTAGATGTAAGGTGACTAGGAAAGTTACTAATAAAAAAGAATCTTAAAAGAATTTTACATATAAAAATAAAGAACA TGGAGGAATTTAAAATGAGT
Downstream 100 bases:
>100_bases TAGTAAATAATATATAGAATTTTGATATATTATTAATTATATAAATGAAGACTAACACAGCTGTGTTAGTCTTTATTTAT ATTGTTTGAATTATTAATTG
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MFCFQCQETAGCKGCTVRGVCGKTEDVAKIQDLLIFVTKGLATVANEGRKVGIVDKKVNRMIIDNLFITITNANFDFKAI EKRVKDTLVAREELKERVQAKGGNPIGSDFKGCATWTATTSEEMMEKASQVGVLATENEDIRSLRELIMYGLKGLAAYME HAMNLGHDKEEVHAFMAETLVKILDDSLSADELTALALETGKFGVDGMALLDEANTSTYGHPEITKVNIGVRNNPGILIS GHDLKDLEMLLEQTEGTGVDVYTHGEMLPGHYYPKFKKYAHFAGNYGNAWWLQNKEFASFNGPILMTTNCITPVQDSYRG RIFTTGAVGYEGCIHITADENGYKDFSQIIELAKTCKAPTEIETGEIVGGFAHNQVLALADQVVDAVKSGAIRRFFVMAG CDGRAKSRDYYREFAEKLPKDTVILTAGCAKYKYNKLPLGDINGIPRVLDAGQCNDSYSLVVIALKLAEVFGTDSVNELP ISYNIAWYEQKAVIVLLSLLHLGVKNIHLGPTLPAFLSPNVAKVLVENFGIGGITNVEDDMKMFLGE
Sequences:
>Translated_547_residues MFCFQCQETAGCKGCTVRGVCGKTEDVAKIQDLLIFVTKGLATVANEGRKVGIVDKKVNRMIIDNLFITITNANFDFKAI EKRVKDTLVAREELKERVQAKGGNPIGSDFKGCATWTATTSEEMMEKASQVGVLATENEDIRSLRELIMYGLKGLAAYME HAMNLGHDKEEVHAFMAETLVKILDDSLSADELTALALETGKFGVDGMALLDEANTSTYGHPEITKVNIGVRNNPGILIS GHDLKDLEMLLEQTEGTGVDVYTHGEMLPGHYYPKFKKYAHFAGNYGNAWWLQNKEFASFNGPILMTTNCITPVQDSYRG RIFTTGAVGYEGCIHITADENGYKDFSQIIELAKTCKAPTEIETGEIVGGFAHNQVLALADQVVDAVKSGAIRRFFVMAG CDGRAKSRDYYREFAEKLPKDTVILTAGCAKYKYNKLPLGDINGIPRVLDAGQCNDSYSLVVIALKLAEVFGTDSVNELP ISYNIAWYEQKAVIVLLSLLHLGVKNIHLGPTLPAFLSPNVAKVLVENFGIGGITNVEDDMKMFLGE >Mature_547_residues MFCFQCQETAGCKGCTVRGVCGKTEDVAKIQDLLIFVTKGLATVANEGRKVGIVDKKVNRMIIDNLFITITNANFDFKAI EKRVKDTLVAREELKERVQAKGGNPIGSDFKGCATWTATTSEEMMEKASQVGVLATENEDIRSLRELIMYGLKGLAAYME HAMNLGHDKEEVHAFMAETLVKILDDSLSADELTALALETGKFGVDGMALLDEANTSTYGHPEITKVNIGVRNNPGILIS GHDLKDLEMLLEQTEGTGVDVYTHGEMLPGHYYPKFKKYAHFAGNYGNAWWLQNKEFASFNGPILMTTNCITPVQDSYRG RIFTTGAVGYEGCIHITADENGYKDFSQIIELAKTCKAPTEIETGEIVGGFAHNQVLALADQVVDAVKSGAIRRFFVMAG CDGRAKSRDYYREFAEKLPKDTVILTAGCAKYKYNKLPLGDINGIPRVLDAGQCNDSYSLVVIALKLAEVFGTDSVNELP ISYNIAWYEQKAVIVLLSLLHLGVKNIHLGPTLPAFLSPNVAKVLVENFGIGGITNVEDDMKMFLGE
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family
Homologues:
Organism=Escherichia coli, GI87081794, Length=563, Percent_Identity=42.2735346358792, Blast_Score=435, Evalue=1e-123,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HCP_CLOPE (Q8XHA1)
Other databases:
- EMBL: BA000016 - RefSeq: NP_563500.2 - ProteinModelPortal: Q8XHA1 - SMR: Q8XHA1 - GeneID: 990961 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE2584 - NMPDR: fig|195102.1.peg.2647 - HOGENOM: HBG294215 - OMA: AKTCKAP - PhylomeDB: Q8XHA1 - ProtClustDB: PRK05290 - BioCyc: CPER195102:CPE2584-MONOMER - GO: GO:0005737 - HAMAP: MF_00069 - InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 - Gene3D: G3DSA:3.40.50.2030 - Gene3D: G3DSA:1.20.1270.20 - PIRSF: PIRSF000076 - TIGRFAMs: TIGR01703
Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like
EC number: NA
Molecular weight: Translated: 59982; Mature: 59982
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCFQCQETAGCKGCTVRGVCGKTEDVAKIQDLLIFVTKGLATVANEGRKVGIVDKKVNR CCEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH MIIDNLFITITNANFDFKAIEKRVKDTLVAREELKERVQAKGGNPIGSDFKGCATWTATT HEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC SEEMMEKASQVGVLATENEDIRSLRELIMYGLKGLAAYMEHAMNLGHDKEEVHAFMAETL HHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VKILDDSLSADELTALALETGKFGVDGMALLDEANTSTYGHPEITKVNIGVRNNPGILIS HHHHHCCCCHHHHEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEE GHDLKDLEMLLEQTEGTGVDVYTHGEMLPGHYYPKFKKYAHFAGNYGNAWWLQNKEFASF CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCC NGPILMTTNCITPVQDSYRGRIFTTGAVGYEGCIHITADENGYKDFSQIIELAKTCKAPT CCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCC EIETGEIVGGFAHNQVLALADQVVDAVKSGAIRRFFVMAGCDGRAKSRDYYREFAEKLPK CCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC DTVILTAGCAKYKYNKLPLGDINGIPRVLDAGQCNDSYSLVVIALKLAEVFGTDSVNELP CEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC ISYNIAWYEQKAVIVLLSLLHLGVKNIHLGPTLPAFLSPNVAKVLVENFGIGGITNVEDD EEEEEEEECCHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHH MKMFLGE HHHHHCC >Mature Secondary Structure MFCFQCQETAGCKGCTVRGVCGKTEDVAKIQDLLIFVTKGLATVANEGRKVGIVDKKVNR CCEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH MIIDNLFITITNANFDFKAIEKRVKDTLVAREELKERVQAKGGNPIGSDFKGCATWTATT HEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCC SEEMMEKASQVGVLATENEDIRSLRELIMYGLKGLAAYMEHAMNLGHDKEEVHAFMAETL HHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VKILDDSLSADELTALALETGKFGVDGMALLDEANTSTYGHPEITKVNIGVRNNPGILIS HHHHHCCCCHHHHEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEECCCCEEEE GHDLKDLEMLLEQTEGTGVDVYTHGEMLPGHYYPKFKKYAHFAGNYGNAWWLQNKEFASF CCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCC NGPILMTTNCITPVQDSYRGRIFTTGAVGYEGCIHITADENGYKDFSQIIELAKTCKAPT CCCEEEEECCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCC EIETGEIVGGFAHNQVLALADQVVDAVKSGAIRRFFVMAGCDGRAKSRDYYREFAEKLPK CCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCC DTVILTAGCAKYKYNKLPLGDINGIPRVLDAGQCNDSYSLVVIALKLAEVFGTDSVNELP CEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC ISYNIAWYEQKAVIVLLSLLHLGVKNIHLGPTLPAFLSPNVAKVLVENFGIGGITNVEDD EEEEEEEECCHHHHHHHHHHHCCCCEEECCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHH MKMFLGE HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842