| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is 18311547
Identifier: 18311547
GI number: 18311547
Start: 2938206
End: 2938580
Strand: Reverse
Name: 18311547
Synonym: CPE2565
Alternate gene names: NA
Gene position: 2938580-2938206 (Counterclockwise)
Preceding gene: 18311548
Following gene: 18311546
Centisome position: 96.94
GC content: 29.33
Gene sequence:
>375_bases ATGAGTATGCTTAATAATAGCAAAGCTATTCTAACTTATGGTTTAAATGAAAAGGAAACAAAAGACTTTCAAGCAACAGG GCACAAGGTTATTAATATAAGTAATGAAATGGCTTCTATGAAAGTTAAAGACATATTAGAAGGCTTAAAATTTGAAGTTG TTTCAAAGAAAAACTTTGATGAAAAAGTTGTTATATTCAGTAATTTCCCTGATGAAGAATTACAAATGATGGTTTCAATA GCAAAAGTTATTACAGAAAATCCTATAATGGCTGTAGTTACAGAAACCTCTAAAGAATGGCAATTTAACTACCTTGTTGA ACATTTGATTGAAGAAAGAGAATGGTATAGAAGTATGCAAGGAGGAAAAGCTTAA
Upstream 100 bases:
>100_bases GATGAGCCACAAGTTATGGCAAAAGTAACTGTAGAAAATGCAGAGGGTATAGAAGAACCAGAAATACTTTAATTTATGAA TGTATGGGAGGAAGATTAGC
Downstream 100 bases:
>100_bases ATGAGTAGAGTTGGGGAAAGAATAAAAGAGGCTAGAGAAAAAAGTGGAATGACACAAAAAGCTTTAGCTAAAAAGCTAGG TGTAGCTGAGAAGTTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSMLNNSKAILTYGLNEKETKDFQATGHKVINISNEMASMKVKDILEGLKFEVVSKKNFDEKVVIFSNFPDEELQMMVSI AKVITENPIMAVVTETSKEWQFNYLVEHLIEEREWYRSMQGGKA
Sequences:
>Translated_124_residues MSMLNNSKAILTYGLNEKETKDFQATGHKVINISNEMASMKVKDILEGLKFEVVSKKNFDEKVVIFSNFPDEELQMMVSI AKVITENPIMAVVTETSKEWQFNYLVEHLIEEREWYRSMQGGKA >Mature_123_residues SMLNNSKAILTYGLNEKETKDFQATGHKVINISNEMASMKVKDILEGLKFEVVSKKNFDEKVVIFSNFPDEELQMMVSIA KVITENPIMAVVTETSKEWQFNYLVEHLIEEREWYRSMQGGKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14313; Mature: 14181
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLNNSKAILTYGLNEKETKDFQATGHKVINISNEMASMKVKDILEGLKFEVVSKKNFD CCCCCCCCEEEEECCCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHCCHHEEEECCCCCC EKVVIFSNFPDEELQMMVSIAKVITENPIMAVVTETSKEWQFNYLVEHLIEEREWYRSMQ CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC GGKA CCCC >Mature Secondary Structure SMLNNSKAILTYGLNEKETKDFQATGHKVINISNEMASMKVKDILEGLKFEVVSKKNFD CCCCCCCEEEEECCCCCCCCHHHCCCCEEEEECHHHHHHHHHHHHCCHHEEEECCCCCC EKVVIFSNFPDEELQMMVSIAKVITENPIMAVVTETSKEWQFNYLVEHLIEEREWYRSMQ CEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC GGKA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA