Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311546

Identifier: 18311546

GI number: 18311546

Start: 2937534

End: 2938205

Strand: Reverse

Name: 18311546

Synonym: CPE2564

Alternate gene names: NA

Gene position: 2938205-2937534 (Counterclockwise)

Preceding gene: 18311547

Following gene: 18311545

Centisome position: 96.92

GC content: 27.98

Gene sequence:

>672_bases
ATGAGTAGAGTTGGGGAAAGAATAAAAGAGGCTAGAGAAAAAAGTGGAATGACACAAAAAGCTTTAGCTAAAAAGCTAGG
TGTAGCTGAGAAGTTTGTAAATGAAGTTGAAACAGGAAGAAAAATTATAAATGAATCACTTATATCAAAGGTATCAAAGG
TTTTAAATACTGATTTAAATGATATAAATATGGTTGTTACTGATGAGGAACTTCAAAAAGAACTTAAAGCTGAAAAACAA
GTAAGACAAACAAAACCAGCAGAGGTTAATGAAGTTTGGAATCAAGCTTTTGGATCAGTTTTAAAAAATGTTCCAATATA
TGATTATTCATTAGCTCAGGTTAAGGGATATAAACAACTTGCTACTGCTTCAAATAAAATAGATGGTCATACAGCAAACA
AAGTTTTTTATTTAAAAATAGAAAATAATGATATGACTGGCTATAGAATTCAAGAAAATGATTTAGCCTTATGCTATTCA
ATAAAAGAGATAGAAAATAATTCTATTTGTTTAGTTGAATTCAATGGAAAGAGAGTTATTAGACAAATTAAAAAGCTAGA
TAATGTTAAGGCTTTATTAATAAGCAATAATGGTAGCATGAGAACAGAGACAGCTAACATAAAAGAAATTAAGGCAATTG
CTAAGCTTTATAGAATAGAATTTGATTTATAA

Upstream 100 bases:

>100_bases
AGTTACAGAAACCTCTAAAGAATGGCAATTTAACTACCTTGTTGAACATTTGATTGAAGAAAGAGAATGGTATAGAAGTA
TGCAAGGAGGAAAAGCTTAA

Downstream 100 bases:

>100_bases
ATTTAAATACAGAAAGGACAGTTCTAGATTAGAACTGTCCTTTTTATATTTAAATACTTTTTATGTTGGTTATCAAAAAG
AAGAAATTCTGAATAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; XRE Family Transcriptional Regulator; LacI/Xre Family Transcriptional Regulator; LacI Family Transcription Regulator; Plasmid Maintenance System Antidote Protein XRE Family

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSRVGERIKEAREKSGMTQKALAKKLGVAEKFVNEVETGRKIINESLISKVSKVLNTDLNDINMVVTDEELQKELKAEKQ
VRQTKPAEVNEVWNQAFGSVLKNVPIYDYSLAQVKGYKQLATASNKIDGHTANKVFYLKIENNDMTGYRIQENDLALCYS
IKEIENNSICLVEFNGKRVIRQIKKLDNVKALLISNNGSMRTETANIKEIKAIAKLYRIEFDL

Sequences:

>Translated_223_residues
MSRVGERIKEAREKSGMTQKALAKKLGVAEKFVNEVETGRKIINESLISKVSKVLNTDLNDINMVVTDEELQKELKAEKQ
VRQTKPAEVNEVWNQAFGSVLKNVPIYDYSLAQVKGYKQLATASNKIDGHTANKVFYLKIENNDMTGYRIQENDLALCYS
IKEIENNSICLVEFNGKRVIRQIKKLDNVKALLISNNGSMRTETANIKEIKAIAKLYRIEFDL
>Mature_222_residues
SRVGERIKEAREKSGMTQKALAKKLGVAEKFVNEVETGRKIINESLISKVSKVLNTDLNDINMVVTDEELQKELKAEKQV
RQTKPAEVNEVWNQAFGSVLKNVPIYDYSLAQVKGYKQLATASNKIDGHTANKVFYLKIENNDMTGYRIQENDLALCYSI
KEIENNSICLVEFNGKRVIRQIKKLDNVKALLISNNGSMRTETANIKEIKAIAKLYRIEFDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25330; Mature: 25198

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVGERIKEAREKSGMTQKALAKKLGVAEKFVNEVETGRKIINESLISKVSKVLNTDLN
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DINMVVTDEELQKELKAEKQVRQTKPAEVNEVWNQAFGSVLKNVPIYDYSLAQVKGYKQL
CCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ATASNKIDGHTANKVFYLKIENNDMTGYRIQENDLALCYSIKEIENNSICLVEFNGKRVI
HHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEEHHHCCCCCEEEEEECCHHHH
RQIKKLDNVKALLISNNGSMRTETANIKEIKAIAKLYRIEFDL
HHHHHHCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRVGERIKEAREKSGMTQKALAKKLGVAEKFVNEVETGRKIINESLISKVSKVLNTDLN
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DINMVVTDEELQKELKAEKQVRQTKPAEVNEVWNQAFGSVLKNVPIYDYSLAQVKGYKQL
CCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ATASNKIDGHTANKVFYLKIENNDMTGYRIQENDLALCYSIKEIENNSICLVEFNGKRVI
HHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEEHHHCCCCCEEEEEECCHHHH
RQIKKLDNVKALLISNNGSMRTETANIKEIKAIAKLYRIEFDL
HHHHHHCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA