Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311543

Identifier: 18311543

GI number: 18311543

Start: 2932193

End: 2933941

Strand: Reverse

Name: 18311543

Synonym: CPE2561

Alternate gene names: NA

Gene position: 2933941-2932193 (Counterclockwise)

Preceding gene: 18311544

Following gene: 18311542

Centisome position: 96.78

GC content: 31.96

Gene sequence:

>1749_bases
ATGGAAACTGTATCTAATAAAGCGAATCTATTAGTTGACCCTGAAAGCATGAATTTTCTTGTTGAATATAGAGGGGATAT
AGAGAATGAAGTTAAGGATATTGAAAATGTTGAAGTCTATATAATTGATGGTACTTATGCTGTTTTATCCATGAAAAATG
TTGACTATGATAGTGTTATTCAGATGATAAATTCCTTGGTTTTTATAGAGCTCGGAGGAATATATACTCTAAGTAGTACA
AGTCCTATAGAGGCCTCTAAGGTAGAAAACTTTCATAATAGTCCATACTTAAAATTGACAGGGAAAGATGTGATTGTTGG
AATTATTGATACTGGAATAGATTATTTAAATCCTGAATTTACTGATAGTAATGGAAAGACTAGAATATTAAAAATATGGG
ATCAATCATTAAAAACAGATAAGTATCCTAAAGATATGTTTTATGGAACTGAGTATAGTGAAGAAGAAATCAATCAAGCA
ATAGAACTTAATAATAGTGGCGGAGATCCATATACCATAGTTCAATCTAAAGATGATGTAGGACATGGCACAGAGATGGC
TTGCATAATAGCAGGAAGTGGAAAGGATGAAAATTTAACAGGGGTAGTTCCAGAATGTGACCTTGCAATAGTAAAGTTAG
ATAGAGCTTTTAAAAAATACACAGATTATTTCTTTGCAAAGGGTGACGCTGTTAAGTATAGAAATGTAGACATACTTTTA
GCAATGAAATATTTATATAATTTATCATTTCAATATAATAAACCAATGGTTATATATATTCCTATGGGAACTAATTTTGG
AGCCCATGATGGATCAAGTATTTTAGAAAGATATATAAATGATATTTCAAATAAAAGAGGAATTGCTGTAATTGCCTCAT
CTGGCAATCAAGGAAATACTAATACCCATGCTGATGGAATAATAACAGAGATGGGTGATAATAAAACCATAGAGCTTGAT
GTTGGAGAGGATCAAGATGGTATTATGATGATTATTTTAGGTTATAAACCTGATAAATTTAAGCTTTCAATAATTTCACC
ATCAGGAGAACTTATTGAAAATGCTAATCCCTTAACTAACTATGGTGGAAATAAAAATTTAGCTGTTGAAAATGGATATA
AAATAAATTTTATATATGAAGGAACAACCATGGATGTTTTTTATGATTCACCAGATGAACTTACTGGAGGGGAGAGAATT
GTAATAAGAGCACAAAATTTAAAGCCTGGTATATGGAGATTTAGATTAACTGGACAGCATATAACCTTTGGAAATTTTGA
TGCCTATATATTGCAAAAAGAATTATTAGCAGAGGGAACAAAATTTTTAATATCATCACCATACACAACATTGACCATTC
CAGGAGCCGCAGAGAAAATGATAACTGTAGCTTCATATAATCAAGAGAATAATACCATATTATCTTCATCAGGAAGAGGG
TATGCAAGAAATGATATTATTCAACCTATTATTGCAGCCGGTGGAGTAAATGCTTTAACTATAAACAACAAAGGAGAAAA
GGTATCAGTTAGTGGGGGAAGCGTCGCTGCGGCTATAGTAGCTGGGTGCTGTGCAATGTTATTTCAATGGGGAATTGTTT
ATAATAATGATCCAACACTATATGTAGCTAAACTTCAAACATACCTAATAAGAGGTGTGAATACTAGAGAAGGTGACATG
TACCCAAATCGAGAGTGGGGATATGGAACTATAGATATGATCAATGTTTTTAATAGTTTAAGAACCTAG

Upstream 100 bases:

>100_bases
AGAGGACGATCTTTGGTGAGGCATATCCAAATCCAGACTTGGGATATGGATTTGTATGTTTAGATAGAACAATGGAATTA
TTAATTAATAGGAGATAGTT

Downstream 100 bases:

>100_bases
AGTTTTAAATATTACAAAGTAAAAAATAATTTTGATTATATTTTAATTACAAATACTTATTAACAAAATAGATATTAATC
TCATAAACTATATGGTATTA

Product: Ser-type protease

Products: NA

Alternate protein names: Peptidase S8 And S; Subtilase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Subtilisin Like Protease; Ser-Type Protease; Germination-Specific Protease; Subtilase; Serine-Type Protease; Spore-Cortex-Lytic; Protease CspB; DNA/RNA Non-Specific Endonuclease

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
METVSNKANLLVDPESMNFLVEYRGDIENEVKDIENVEVYIIDGTYAVLSMKNVDYDSVIQMINSLVFIELGGIYTLSST
SPIEASKVENFHNSPYLKLTGKDVIVGIIDTGIDYLNPEFTDSNGKTRILKIWDQSLKTDKYPKDMFYGTEYSEEEINQA
IELNNSGGDPYTIVQSKDDVGHGTEMACIIAGSGKDENLTGVVPECDLAIVKLDRAFKKYTDYFFAKGDAVKYRNVDILL
AMKYLYNLSFQYNKPMVIYIPMGTNFGAHDGSSILERYINDISNKRGIAVIASSGNQGNTNTHADGIITEMGDNKTIELD
VGEDQDGIMMIILGYKPDKFKLSIISPSGELIENANPLTNYGGNKNLAVENGYKINFIYEGTTMDVFYDSPDELTGGERI
VIRAQNLKPGIWRFRLTGQHITFGNFDAYILQKELLAEGTKFLISSPYTTLTIPGAAEKMITVASYNQENNTILSSSGRG
YARNDIIQPIIAAGGVNALTINNKGEKVSVSGGSVAAAIVAGCCAMLFQWGIVYNNDPTLYVAKLQTYLIRGVNTREGDM
YPNREWGYGTIDMINVFNSLRT

Sequences:

>Translated_582_residues
METVSNKANLLVDPESMNFLVEYRGDIENEVKDIENVEVYIIDGTYAVLSMKNVDYDSVIQMINSLVFIELGGIYTLSST
SPIEASKVENFHNSPYLKLTGKDVIVGIIDTGIDYLNPEFTDSNGKTRILKIWDQSLKTDKYPKDMFYGTEYSEEEINQA
IELNNSGGDPYTIVQSKDDVGHGTEMACIIAGSGKDENLTGVVPECDLAIVKLDRAFKKYTDYFFAKGDAVKYRNVDILL
AMKYLYNLSFQYNKPMVIYIPMGTNFGAHDGSSILERYINDISNKRGIAVIASSGNQGNTNTHADGIITEMGDNKTIELD
VGEDQDGIMMIILGYKPDKFKLSIISPSGELIENANPLTNYGGNKNLAVENGYKINFIYEGTTMDVFYDSPDELTGGERI
VIRAQNLKPGIWRFRLTGQHITFGNFDAYILQKELLAEGTKFLISSPYTTLTIPGAAEKMITVASYNQENNTILSSSGRG
YARNDIIQPIIAAGGVNALTINNKGEKVSVSGGSVAAAIVAGCCAMLFQWGIVYNNDPTLYVAKLQTYLIRGVNTREGDM
YPNREWGYGTIDMINVFNSLRT
>Mature_582_residues
METVSNKANLLVDPESMNFLVEYRGDIENEVKDIENVEVYIIDGTYAVLSMKNVDYDSVIQMINSLVFIELGGIYTLSST
SPIEASKVENFHNSPYLKLTGKDVIVGIIDTGIDYLNPEFTDSNGKTRILKIWDQSLKTDKYPKDMFYGTEYSEEEINQA
IELNNSGGDPYTIVQSKDDVGHGTEMACIIAGSGKDENLTGVVPECDLAIVKLDRAFKKYTDYFFAKGDAVKYRNVDILL
AMKYLYNLSFQYNKPMVIYIPMGTNFGAHDGSSILERYINDISNKRGIAVIASSGNQGNTNTHADGIITEMGDNKTIELD
VGEDQDGIMMIILGYKPDKFKLSIISPSGELIENANPLTNYGGNKNLAVENGYKINFIYEGTTMDVFYDSPDELTGGERI
VIRAQNLKPGIWRFRLTGQHITFGNFDAYILQKELLAEGTKFLISSPYTTLTIPGAAEKMITVASYNQENNTILSSSGRG
YARNDIIQPIIAAGGVNALTINNKGEKVSVSGGSVAAAIVAGCCAMLFQWGIVYNNDPTLYVAKLQTYLIRGVNTREGDM
YPNREWGYGTIDMINVFNSLRT

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64397; Mature: 64397

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVSNKANLLVDPESMNFLVEYRGDIENEVKDIENVEVYIIDGTYAVLSMKNVDYDSVI
CCCCCCCCCEEECCCCCEEEEEECCCCHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHH
QMINSLVFIELGGIYTLSSTSPIEASKVENFHNSPYLKLTGKDVIVGIIDTGIDYLNPEF
HHHHCEEEEEECCEEEECCCCCCCHHHHHHCCCCCEEEEECCEEEEEEECCCCHHCCCCE
TDSNGKTRILKIWDQSLKTDKYPKDMFYGTEYSEEEINQAIELNNSGGDPYTIVQSKDDV
ECCCCCEEEEEEECHHCCCCCCCCHHCCCCCCCHHHHHHEEEECCCCCCEEEEEECCCCC
GHGTEMACIIAGSGKDENLTGVVPECDLAIVKLDRAFKKYTDYFFAKGDAVKYRNVDILL
CCCCEEEEEEECCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHEEECCCEEEEECCEEEE
AMKYLYNLSFQYNKPMVIYIPMGTNFGAHDGSSILERYINDISNKRGIAVIASSGNQGNT
EEHHHHCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NTHADGIITEMGDNKTIELDVGEDQDGIMMIILGYKPDKFKLSIISPSGELIENANPLTN
CCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCHHHCCCCCCCC
YGGNKNLAVENGYKINFIYEGTTMDVFYDSPDELTGGERIVIRAQNLKPGIWRFRLTGQH
CCCCCCEEEECCEEEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCE
ITFGNFDAYILQKELLAEGTKFLISSPYTTLTIPGAAEKMITVASYNQENNTILSSSGRG
EEECCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCEEEECCCCC
YARNDIIQPIIAAGGVNALTINNKGEKVSVSGGSVAAAIVAGCCAMLFQWGIVYNNDPTL
CCHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCCE
YVAKLQTYLIRGVNTREGDMYPNREWGYGTIDMINVFNSLRT
EEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
METVSNKANLLVDPESMNFLVEYRGDIENEVKDIENVEVYIIDGTYAVLSMKNVDYDSVI
CCCCCCCCCEEECCCCCEEEEEECCCCHHHHHCCCCEEEEEEECCEEEEEECCCCHHHHH
QMINSLVFIELGGIYTLSSTSPIEASKVENFHNSPYLKLTGKDVIVGIIDTGIDYLNPEF
HHHHCEEEEEECCEEEECCCCCCCHHHHHHCCCCCEEEEECCEEEEEEECCCCHHCCCCE
TDSNGKTRILKIWDQSLKTDKYPKDMFYGTEYSEEEINQAIELNNSGGDPYTIVQSKDDV
ECCCCCEEEEEEECHHCCCCCCCCHHCCCCCCCHHHHHHEEEECCCCCCEEEEEECCCCC
GHGTEMACIIAGSGKDENLTGVVPECDLAIVKLDRAFKKYTDYFFAKGDAVKYRNVDILL
CCCCEEEEEEECCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHEEECCCEEEEECCEEEE
AMKYLYNLSFQYNKPMVIYIPMGTNFGAHDGSSILERYINDISNKRGIAVIASSGNQGNT
EEHHHHCCEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
NTHADGIITEMGDNKTIELDVGEDQDGIMMIILGYKPDKFKLSIISPSGELIENANPLTN
CCCCCEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCHHHCCCCCCCC
YGGNKNLAVENGYKINFIYEGTTMDVFYDSPDELTGGERIVIRAQNLKPGIWRFRLTGQH
CCCCCCEEEECCEEEEEEEECCEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEECCE
ITFGNFDAYILQKELLAEGTKFLISSPYTTLTIPGAAEKMITVASYNQENNTILSSSGRG
EEECCCHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCEEEEEEECCCCCCEEEECCCCC
YARNDIIQPIIAAGGVNALTINNKGEKVSVSGGSVAAAIVAGCCAMLFQWGIVYNNDPTL
CCHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCCE
YVAKLQTYLIRGVNTREGDMYPNREWGYGTIDMINVFNSLRT
EEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA