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The map label for this gene is trpH [H]

Identifier: 18311129

GI number: 18311129

Start: 2458182

End: 2459000

Strand: Reverse

Name: trpH [H]

Synonym: CPE2147

Alternate gene names: 18311129

Gene position: 2459000-2458182 (Counterclockwise)

Preceding gene: 18311130

Following gene: 18311128

Centisome position: 81.12

GC content: 28.45

Gene sequence:

>819_bases
ATGAATTTAGTAAGAACTGATTTACATATGCATACTAGAGCTTCTGATGGAACACTTACACCAAAGGAGTTATTAAAGGA
AATAGTAGAAAAAGACATAAAACTATTTTCAGTTACAGATCATGACTCTATAGGAAGCTTAGAGGAAATGCAAGATTTAA
CTGAAGAAATGGATATTAAATTCATTCCAGGGGTAGAGGTTTCAAGCATAATAAATGGAGAACAGTTTCACATATTAGCT
TATAATTTTGATAAAAACAATAAAGAGTTAATGAGTTTAATAGAAAATAATGATAGATTGCTTCAAGAGAAAGACGATAA
TTCAATAAAGCAATTAATTGATGCTGGATATGATATAGATTTTGAAGATTATTTGTCTTATGAACATGATCCTTCAAAGG
GGGGATGGAAAACTCTTAACTTTTTAATTGATAGAGGAATATGCAAAAATATTGATGAGTTTTTTAATAAAATATTTGTT
GGTGAAAGAGCTTTGAAATATCCAGATTTTCCTCATCCTAAAGAAGTTATAGAAACTATAAAAAAAGCTAATGGAATTGT
TGTTTTAGCTCACCCTAAGTATGGAAAGTCTCAATTTAAATTAGATGAAATGTTAGAATTATTTAAAAACTGGGGTGTAG
ATGGAATAGAGTGTTATCATCCTCACCATGATGAGGATACAATAAAATATTTAGTAGATTATTGTACAAAAAATAATCTA
ATAATAACAGGTGGATCTGATTATCACGGAGGACTTATATCTAAGAGAAGTTTAGGAACACCAGAGTTTTATGCAAAATA
TGATTTGTTAGATAAATAA

Upstream 100 bases:

>100_bases
ATAGAGAGATATAAATAAACATATAAAAAGAATAAATAAATTAAATAGTAAATAATAAATAATAAATAATAAACATATTA
GACTATGGGAGGATATAGAC

Downstream 100 bases:

>100_bases
ATTGTTATTAAAATAATATATTAGTTTAGTTTTTAAGCTTTATTGAAAATAATGCTTTATGGAATTTATTGATTTGAATT
CTAAAAGCAAATTTCAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNLVRTDLHMHTRASDGTLTPKELLKEIVEKDIKLFSVTDHDSIGSLEEMQDLTEEMDIKFIPGVEVSSIINGEQFHILA
YNFDKNNKELMSLIENNDRLLQEKDDNSIKQLIDAGYDIDFEDYLSYEHDPSKGGWKTLNFLIDRGICKNIDEFFNKIFV
GERALKYPDFPHPKEVIETIKKANGIVVLAHPKYGKSQFKLDEMLELFKNWGVDGIECYHPHHDEDTIKYLVDYCTKNNL
IITGGSDYHGGLISKRSLGTPEFYAKYDLLDK

Sequences:

>Translated_272_residues
MNLVRTDLHMHTRASDGTLTPKELLKEIVEKDIKLFSVTDHDSIGSLEEMQDLTEEMDIKFIPGVEVSSIINGEQFHILA
YNFDKNNKELMSLIENNDRLLQEKDDNSIKQLIDAGYDIDFEDYLSYEHDPSKGGWKTLNFLIDRGICKNIDEFFNKIFV
GERALKYPDFPHPKEVIETIKKANGIVVLAHPKYGKSQFKLDEMLELFKNWGVDGIECYHPHHDEDTIKYLVDYCTKNNL
IITGGSDYHGGLISKRSLGTPEFYAKYDLLDK
>Mature_272_residues
MNLVRTDLHMHTRASDGTLTPKELLKEIVEKDIKLFSVTDHDSIGSLEEMQDLTEEMDIKFIPGVEVSSIINGEQFHILA
YNFDKNNKELMSLIENNDRLLQEKDDNSIKQLIDAGYDIDFEDYLSYEHDPSKGGWKTLNFLIDRGICKNIDEFFNKIFV
GERALKYPDFPHPKEVIETIKKANGIVVLAHPKYGKSQFKLDEMLELFKNWGVDGIECYHPHHDEDTIKYLVDYCTKNNL
IITGGSDYHGGLISKRSLGTPEFYAKYDLLDK

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=252, Percent_Identity=25.7936507936508, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31372; Mature: 31372

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLVRTDLHMHTRASDGTLTPKELLKEIVEKDIKLFSVTDHDSIGSLEEMQDLTEEMDIK
CCCEECCHHHEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEE
FIPGVEVSSIINGEQFHILAYNFDKNNKELMSLIENNDRLLQEKDDNSIKQLIDAGYDID
EECCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCC
FEDYLSYEHDPSKGGWKTLNFLIDRGICKNIDEFFNKIFVGERALKYPDFPHPKEVIETI
HHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHH
KKANGIVVLAHPKYGKSQFKLDEMLELFKNWGVDGIECYHPHHDEDTIKYLVDYCTKNNL
HHCCCEEEEECCCCCCHHCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCE
IITGGSDYHGGLISKRSLGTPEFYAKYDLLDK
EEECCCCCCCCCCCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MNLVRTDLHMHTRASDGTLTPKELLKEIVEKDIKLFSVTDHDSIGSLEEMQDLTEEMDIK
CCCEECCHHHEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCEE
FIPGVEVSSIINGEQFHILAYNFDKNNKELMSLIENNDRLLQEKDDNSIKQLIDAGYDID
EECCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCC
FEDYLSYEHDPSKGGWKTLNFLIDRGICKNIDEFFNKIFVGERALKYPDFPHPKEVIETI
HHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHH
KKANGIVVLAHPKYGKSQFKLDEMLELFKNWGVDGIECYHPHHDEDTIKYLVDYCTKNNL
HHCCCEEEEECCCCCCHHCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCE
IITGGSDYHGGLISKRSLGTPEFYAKYDLLDK
EEECCCCCCCCCCCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]