| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311128
Identifier: 18311128
GI number: 18311128
Start: 2457117
End: 2457920
Strand: Reverse
Name: 18311128
Synonym: CPE2146
Alternate gene names: NA
Gene position: 2457920-2457117 (Counterclockwise)
Preceding gene: 18311129
Following gene: 18311127
Centisome position: 81.08
GC content: 28.61
Gene sequence:
>804_bases GTGAAGTACACTAGAATTGATGTAAAGAATAAAAAAAGGAGTAATGGACATAACAACAATAATAACAATGATGGTAAAAG CTTTATATTACTTTTTATTGGGGTAATTGTTGTGGCACTTGTAATATCAACTGCAATGTCTAAGTTTATATGGCCTGAAG GAAAGAAAACAGCAGAAAAGGAAAGAATAGAAGCAACTTCTGGAGAAAATAAAGAGACAAGTGAGAAAGATAAGGAAAAT AACAAAGCATCAAAAGAAGATGAAAAGCCGAAAGATAATAAAGTAATGGCTGAAAGTGTAGGTGGACAAGAGTATGTAAT GATTCAATGTGGTTTCTACTCAAATAAAGAGAATGCAAATAATGTAAAGGCTCAATTAGAAGATGATTATATTGCAGTAT CCTTAAGTGAAGCGGAAAATTATAGGGTAATAGTCCACATTGGAAATGAAGAAGAAGCTACTAAACTTTCTAATGAGTTA AATGAAAAAGGTGTTAGTAATACAAAGGGAAGATTTATGATTCCAAAGACTGATGTGTGTAGTAATGAGATTATAGAGAT AGTAAATGGTTATGTAAATATAATAAATAAATTAAAAGAGGATTCTGTTAAGGGTGTTAAGACAACAGAGTTTAAAGAAT GGGTTAATAGCTTAGAGGAACACAGTGATTCTGAGTATTTTAAAGTGTTTAAAGAATTAAAAGATGGTATAAATAAAATT CCAGATGAAATAACTAAAAAAAATATAGAAGAAAGTTACCAAATAGTGTTTAATACTTTAAATAATTTTAAAGTAAACAA ATAA
Upstream 100 bases:
>100_bases TACAAATTATGTAAAATAAATATATAAAGAGGGGCTTTACATAATTTGTAAAAAGAAAAATGCTTAGTAAAGTTAAATTA AAAGAAAGGTTGGGGGAAGG
Downstream 100 bases:
>100_bases TTGTAATTTATTTTTAATTTATAGTAACATATTTTTAAATTATAATGAAAATGAAAGAGTTAAATTCTCTTTCATTTTTT TCTTTATAATTTACTATACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKYTRIDVKNKKRSNGHNNNNNNDGKSFILLFIGVIVVALVISTAMSKFIWPEGKKTAEKERIEATSGENKETSEKDKEN NKASKEDEKPKDNKVMAESVGGQEYVMIQCGFYSNKENANNVKAQLEDDYIAVSLSEAENYRVIVHIGNEEEATKLSNEL NEKGVSNTKGRFMIPKTDVCSNEIIEIVNGYVNIINKLKEDSVKGVKTTEFKEWVNSLEEHSDSEYFKVFKELKDGINKI PDEITKKNIEESYQIVFNTLNNFKVNK
Sequences:
>Translated_267_residues MKYTRIDVKNKKRSNGHNNNNNNDGKSFILLFIGVIVVALVISTAMSKFIWPEGKKTAEKERIEATSGENKETSEKDKEN NKASKEDEKPKDNKVMAESVGGQEYVMIQCGFYSNKENANNVKAQLEDDYIAVSLSEAENYRVIVHIGNEEEATKLSNEL NEKGVSNTKGRFMIPKTDVCSNEIIEIVNGYVNIINKLKEDSVKGVKTTEFKEWVNSLEEHSDSEYFKVFKELKDGINKI PDEITKKNIEESYQIVFNTLNNFKVNK >Mature_267_residues MKYTRIDVKNKKRSNGHNNNNNNDGKSFILLFIGVIVVALVISTAMSKFIWPEGKKTAEKERIEATSGENKETSEKDKEN NKASKEDEKPKDNKVMAESVGGQEYVMIQCGFYSNKENANNVKAQLEDDYIAVSLSEAENYRVIVHIGNEEEATKLSNEL NEKGVSNTKGRFMIPKTDVCSNEIIEIVNGYVNIINKLKEDSVKGVKTTEFKEWVNSLEEHSDSEYFKVFKELKDGINKI PDEITKKNIEESYQIVFNTLNNFKVNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30394; Mature: 30394
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYTRIDVKNKKRSNGHNNNNNNDGKSFILLFIGVIVVALVISTAMSKFIWPEGKKTAEK CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ERIEATSGENKETSEKDKENNKASKEDEKPKDNKVMAESVGGQEYVMIQCGFYSNKENAN HHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCC NVKAQLEDDYIAVSLSEAENYRVIVHIGNEEEATKLSNELNEKGVSNTKGRFMIPKTDVC CHHEEECCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHH SNEIIEIVNGYVNIINKLKEDSVKGVKTTEFKEWVNSLEEHSDSEYFKVFKELKDGINKI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC PDEITKKNIEESYQIVFNTLNNFKVNK HHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKYTRIDVKNKKRSNGHNNNNNNDGKSFILLFIGVIVVALVISTAMSKFIWPEGKKTAEK CCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH ERIEATSGENKETSEKDKENNKASKEDEKPKDNKVMAESVGGQEYVMIQCGFYSNKENAN HHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCC NVKAQLEDDYIAVSLSEAENYRVIVHIGNEEEATKLSNELNEKGVSNTKGRFMIPKTDVC CHHEEECCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHH SNEIIEIVNGYVNIINKLKEDSVKGVKTTEFKEWVNSLEEHSDSEYFKVFKELKDGINKI HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC PDEITKKNIEESYQIVFNTLNNFKVNK HHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA