| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311117
Identifier: 18311117
GI number: 18311117
Start: 2445832
End: 2446674
Strand: Reverse
Name: 18311117
Synonym: CPE2135
Alternate gene names: NA
Gene position: 2446674-2445832 (Counterclockwise)
Preceding gene: 18311118
Following gene: 18311116
Centisome position: 80.71
GC content: 27.16
Gene sequence:
>843_bases ATGGGTAGCTATAACAAAGAATATGAGAAGTATTATAGAAAAATAAATAAGACAAGAAAAACTTCTCCTAATCATGAGGT GAATTTCAAAACTAAAGGTTCTTATAAGAGAAGAGAGAAAGATAGTTTGGGAAAATACGCAATTAAGGAAGTTGTTTTCT CATCAATTTTAGGTTTTTTTATTTTTTCTAGCTTTTTTTTAATGGGACAAGTAGAAAATGAATTTTTAGTAGGATTAAGT AGAAAATTTAAAGAGGTAATATCAACTGATGGATACTATAAAAACTTAGATTTAAATGAAAGTAAAATAGTAGCTACTAT TAGTAGTGGAATAAAGGATGGTTTTAATTTAGAGAATTCTAATTTTAAAAAAGAACCTAAACAAGCTAGTGAAGAAAAGG TATCTGAAAATAGTGGAGAAGTAAGTGCTTTTAATAATTTTCAGGTTATTGAGAAGGAATCTATAGATTTTTTAAAGGAA AGTAAGGTAATTCCTTTTAATGGAGAAGTTAAAACTTTGGAAAATAATAATTTAAAGGGAAAAAATATTTATTTAAGTGG TTCAAGGGATGAGGTGAAAAGTCTTTTAAAAGGAACCATAAGTGAAGTGAAAAATGAAAATGGAACATATACTGTGAAGA TGAATTATTATGATGACTTAGAAGTTTTATATCACAATTTAGAAGATGTGGTAAAAAAAGAAGGGGACAGTATAGAAGAG GGAGAGAAAATAGGTATTTCATCTGAGAATGAAAAAGTAAAAGGTGTAATAATTCAGGTATTATTTAAAAATGAGTATGT TAATCCAGAAGAAAGCATGAGGTTTTTAGGAGATAAGCAGTGA
Upstream 100 bases:
>100_bases TTATATCTATTATATTTCACTTTGTAATAAAAGTTCTATAAGATGCATAAAAAAAATATATATTAAGTATAATTAAAGAT TTCTAGAAAGGAGAAGAAAA
Downstream 100 bases:
>100_bases AAATCGACAAAAAGATAATTATACAGCTTGTTACATTTTTTATTTTAGGATTTAAATTTAACTTAGCTTTAGCTTTTTTT TGGATTATAATACATGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MGSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFFIFSSFFLMGQVENEFLVGLS RKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENSNFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKE SKVIPFNGEVKTLENNNLKGKNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ
Sequences:
>Translated_280_residues MGSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFFIFSSFFLMGQVENEFLVGLS RKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENSNFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKE SKVIPFNGEVKTLENNNLKGKNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ >Mature_279_residues GSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFFIFSSFFLMGQVENEFLVGLSR KFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENSNFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKES KVIPFNGEVKTLENNNLKGKNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEEG EKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32119; Mature: 31987
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFF CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IFSSFFLMGQVENEFLVGLSRKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENS HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEHHHHCCCCCCCCCC NFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKESKVIPFNGEVKTLENNNLKG CCCCCHHHHHHHHHHCCCCCEEECCCEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCC KNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE CEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ CCCCCCCCCCCHHHHHHEEEEHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure GSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFF CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH IFSSFFLMGQVENEFLVGLSRKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENS HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEHHHHCCCCCCCCCC NFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKESKVIPFNGEVKTLENNNLKG CCCCCHHHHHHHHHHCCCCCEEECCCEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCC KNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE CEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ CCCCCCCCCCCHHHHHHEEEEHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA