| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is spoVE [H]
Identifier: 18311118
GI number: 18311118
Start: 2446824
End: 2447948
Strand: Reverse
Name: spoVE [H]
Synonym: CPE2136
Alternate gene names: 18311118
Gene position: 2447948-2446824 (Counterclockwise)
Preceding gene: 18311119
Following gene: 18311117
Centisome position: 80.75
GC content: 31.73
Gene sequence:
>1125_bases ATGCTTAGTAGACTAAAACTAGATAGTAAACTAAGAAGAGAAATTGATTATAAGCTTTTAGTATCTATGATATTAATAGT ACTGTTTGGAATATTAAACATATACTTAGGGACAAAGTCTCAAAGAGGATTTTTTTTCGCTAAGAAACAGTTAATATGGT TTATAATATCAATGGCTGCATTGTACATAATATTACTTTGGAATTATAACATAATTTATAATTATGTTGAGATATTCTAT TGGGGATCCATAGTTCTACTTATAATAACCAGATTTGCAGGAAGTGTAATAAATGGTGCTAGAGGATGGATTGTATTAGG TCCTGTAAGTATTCAGCCCTCGGAACTGGCCAAAACGGCCATGATACTTATGCTGGCCAAGAAGATGGAACAAGTTGATT TAAGAATAAATGACTTTAGAAATTTTATTAAGGTTGCCATGTATGCAATAATACCAATGATATTTATAGTTGTACAACCT GACATGGGTATGACTATGGTTTCATTTTTTATAGCACTTGGTATATTCTTTGCAGCTGGATTAGATATGAAAGTAATAGG TGCAGGGCTTTTATCAATAATAGTGGCAATAGCCTTAGTTTGGAATTCAGGGCTTATAAAAGACTATCAAAAGGATAGAC TTGTTGGATTCTTAAATCCTGATGGAGATGAGTTAGGTATAAACCTTCAATTAACTCAATCAAAAATAGGGATTGGATCT GGAGGATTCTTTGGAACTGGGTTAGATTTAAATGGAGAAGTTGGTGGTTATTCCTCAGAATTCGTACCAGAAAGGCAAAC AGACTTTATATTCGCTGTAATAGGTGAACATTGGGGAACAGTAGGAGGAATAGTATTACTATTATTATACGCAATAATGA TATATAGAATAATAATGACGGCTAAAACCTCTAAGGATATATTTGGCTCCATAATATGTGTTGGATTTGCCTCTTATTTT ATATTTGCTATATTACAGAATATAGGAATGACAATAGGTATAATGCCTATAACAGGAATAACATTACCATTAGTAAGCTA TGGAGGAAGTTCATTGCTTACAACTATAGTGAGTATAGCCTTGGTTTTAAATATATCTATGAGAAAGAAAAAGTTAAAAT TCTAA
Upstream 100 bases:
>100_bases GTCTTTTAAAAAGTTCAGAATTTTGTAATTGAAAATAGGTAAAAATAAAGTATTATATAAATAGTTATGTTAAATAAATA AAATTTATGGAGGTACTATA
Downstream 100 bases:
>100_bases TAAAAATAAAAGTATTAAGATCAATAATGATTTTAATACTTTTATTTTTTTATATCTATTATATTTCACTTTGTAATAAA AGTTCTATAAGATGCATAAA
Product: cell cycle protein, FtsW/RodA/SpoVE family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MLSRLKLDSKLRREIDYKLLVSMILIVLFGILNIYLGTKSQRGFFFAKKQLIWFIISMAALYIILLWNYNIIYNYVEIFY WGSIVLLIITRFAGSVINGARGWIVLGPVSIQPSELAKTAMILMLAKKMEQVDLRINDFRNFIKVAMYAIIPMIFIVVQP DMGMTMVSFFIALGIFFAAGLDMKVIGAGLLSIIVAIALVWNSGLIKDYQKDRLVGFLNPDGDELGINLQLTQSKIGIGS GGFFGTGLDLNGEVGGYSSEFVPERQTDFIFAVIGEHWGTVGGIVLLLLYAIMIYRIIMTAKTSKDIFGSIICVGFASYF IFAILQNIGMTIGIMPITGITLPLVSYGGSSLLTTIVSIALVLNISMRKKKLKF
Sequences:
>Translated_374_residues MLSRLKLDSKLRREIDYKLLVSMILIVLFGILNIYLGTKSQRGFFFAKKQLIWFIISMAALYIILLWNYNIIYNYVEIFY WGSIVLLIITRFAGSVINGARGWIVLGPVSIQPSELAKTAMILMLAKKMEQVDLRINDFRNFIKVAMYAIIPMIFIVVQP DMGMTMVSFFIALGIFFAAGLDMKVIGAGLLSIIVAIALVWNSGLIKDYQKDRLVGFLNPDGDELGINLQLTQSKIGIGS GGFFGTGLDLNGEVGGYSSEFVPERQTDFIFAVIGEHWGTVGGIVLLLLYAIMIYRIIMTAKTSKDIFGSIICVGFASYF IFAILQNIGMTIGIMPITGITLPLVSYGGSSLLTTIVSIALVLNISMRKKKLKF >Mature_374_residues MLSRLKLDSKLRREIDYKLLVSMILIVLFGILNIYLGTKSQRGFFFAKKQLIWFIISMAALYIILLWNYNIIYNYVEIFY WGSIVLLIITRFAGSVINGARGWIVLGPVSIQPSELAKTAMILMLAKKMEQVDLRINDFRNFIKVAMYAIIPMIFIVVQP DMGMTMVSFFIALGIFFAAGLDMKVIGAGLLSIIVAIALVWNSGLIKDYQKDRLVGFLNPDGDELGINLQLTQSKIGIGS GGFFGTGLDLNGEVGGYSSEFVPERQTDFIFAVIGEHWGTVGGIVLLLLYAIMIYRIIMTAKTSKDIFGSIICVGFASYF IFAILQNIGMTIGIMPITGITLPLVSYGGSSLLTTIVSIALVLNISMRKKKLKF
Specific function: This is one of the proteins responsible for the rod shape of the cell. It is required for the expression of the enzymatic activity of PBP2, which is thought to synthesize peptidoglycan in the step of initiation of cell elongation [H]
COG id: COG0772
COG function: function code D; Bacterial cell division membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsW/rodA/spoVE family [H]
Homologues:
Organism=Escherichia coli, GI1786277, Length=335, Percent_Identity=32.8358208955224, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1786853, Length=291, Percent_Identity=36.426116838488, Blast_Score=161, Evalue=7e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001182 - InterPro: IPR018365 - InterPro: IPR011923 [H]
Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]
EC number: NA
Molecular weight: Translated: 41510; Mature: 41510
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: PS00428 FTSW_RODA_SPOVE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRLKLDSKLRREIDYKLLVSMILIVLFGILNIYLGTKSQRGFFFAKKQLIWFIISMAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LYIILLWNYNIIYNYVEIFYWGSIVLLIITRFAGSVINGARGWIVLGPVSIQPSELAKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH MILMLAKKMEQVDLRINDFRNFIKVAMYAIIPMIFIVVQPDMGMTMVSFFIALGIFFAAG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC LDMKVIGAGLLSIIVAIALVWNSGLIKDYQKDRLVGFLNPDGDELGINLQLTQSKIGIGS CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCCCC GGFFGTGLDLNGEVGGYSSEFVPERQTDFIFAVIGEHWGTVGGIVLLLLYAIMIYRIIMT CCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AKTSKDIFGSIICVGFASYFIFAILQNIGMTIGIMPITGITLPLVSYGGSSLLTTIVSIA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHH LVLNISMRKKKLKF HHHHHHHHHHHCCC >Mature Secondary Structure MLSRLKLDSKLRREIDYKLLVSMILIVLFGILNIYLGTKSQRGFFFAKKQLIWFIISMAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LYIILLWNYNIIYNYVEIFYWGSIVLLIITRFAGSVINGARGWIVLGPVSIQPSELAKTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH MILMLAKKMEQVDLRINDFRNFIKVAMYAIIPMIFIVVQPDMGMTMVSFFIALGIFFAAG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC LDMKVIGAGLLSIIVAIALVWNSGLIKDYQKDRLVGFLNPDGDELGINLQLTQSKIGIGS CCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCCCC GGFFGTGLDLNGEVGGYSSEFVPERQTDFIFAVIGEHWGTVGGIVLLLLYAIMIYRIIMT CCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AKTSKDIFGSIICVGFASYFIFAILQNIGMTIGIMPITGITLPLVSYGGSSLLTTIVSIA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCHHHHHHHHHHH LVLNISMRKKKLKF HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]