Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311116

Identifier: 18311116

GI number: 18311116

Start: 2444981

End: 2445835

Strand: Reverse

Name: 18311116

Synonym: CPE2134

Alternate gene names: NA

Gene position: 2445835-2444981 (Counterclockwise)

Preceding gene: 18311117

Following gene: 18311115

Centisome position: 80.68

GC content: 23.27

Gene sequence:

>855_bases
GTGAAAATCGACAAAAAGATAATTATACAGCTTGTTACATTTTTTATTTTAGGATTTAAATTTAACTTAGCTTTAGCTTT
TTTTTGGATTATAATACATGAATTAGCTCATTATTTTGTTTTATTAAAATTAAATATAGAGTCAGAGAAATTTAAACTTC
ATATTCTAGGAGCTAGATTAGAGATAAAAGATTATGAAGATTTAAGTTCAAGAGATAAATTAATAGTATGCTTTGCAGGT
CCTATTTTAAATGGAATTGTTGCCATGATTTTTTTCTGCATTTATAAATTAATTTTAAAAAGTGAATATATTTATTCTAC
CTATGAAATAAATTTAGTCCTATTTATTTTTAATTTGCTTCCTACCTATCCCTTAGATGGAGGAAAAATATTAGGAGCGA
TATTAGAGGAGAAGATGATTTTTAAGGATGTCAATAATATATTGATGAAGATAAGCTATTCATTTGGAATAGCATTTATT
TTGTTATCTATATTAGGAATTGTGATTTTAGGTGAAATAAATATAACTAGTATATTAGCAGGAATATTTATAATCTATTT
AAGTTATAATGAGAGAAGAAAGGTAATGTATATAATTATGGGTGATATAACGAAAAAGAGGGAACGATTAATTAATAAGA
AATACATAGACAGTAGAGTAACTTCTGTATATTGTGAACAAGATATGGTTAATCTTCTTAGAATTATTGATAAAAATAGA
TTTAATATATTTTATGTTTTAGATGAAGAAATGAATTTGCTTTATGTCTTAAGAGAAAATGAAATAATAGAGACTTTAAA
GACAATTGGGAACATTAATTTAAGAGAATATTACATTAAGTATAGAAAAGAATAA

Upstream 100 bases:

>100_bases
CATCTGAGAATGAAAAAGTAAAAGGTGTAATAATTCAGGTATTATTTAAAAATGAGTATGTTAATCCAGAAGAAAGCATG
AGGTTTTTAGGAGATAAGCA

Downstream 100 bases:

>100_bases
ATATATTGGTTATAATTATTCTTTGTGATAGAATAGAAATTGTTAATATGAGAGAAGTATAAAGAGGTATACTTCTCTTT
TTATTATAGATATTAGCTTT

Product: peptidase, M50 family

Products: NA

Alternate protein names: Metalloprotease; Stage IV Sporulation Protein FB; Stage IV Sporulation Protein FB Metalloprotease; Sporulation Protein IVFB Related Protein Metallopeptidase; M50 Family Peptidase; Protease; CBS Domain Containing Protein

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKIDKKIIIQLVTFFILGFKFNLALAFFWIIIHELAHYFVLLKLNIESEKFKLHILGARLEIKDYEDLSSRDKLIVCFAG
PILNGIVAMIFFCIYKLILKSEYIYSTYEINLVLFIFNLLPTYPLDGGKILGAILEEKMIFKDVNNILMKISYSFGIAFI
LLSILGIVILGEINITSILAGIFIIYLSYNERRKVMYIIMGDITKKRERLINKKYIDSRVTSVYCEQDMVNLLRIIDKNR
FNIFYVLDEEMNLLYVLRENEIIETLKTIGNINLREYYIKYRKE

Sequences:

>Translated_284_residues
MKIDKKIIIQLVTFFILGFKFNLALAFFWIIIHELAHYFVLLKLNIESEKFKLHILGARLEIKDYEDLSSRDKLIVCFAG
PILNGIVAMIFFCIYKLILKSEYIYSTYEINLVLFIFNLLPTYPLDGGKILGAILEEKMIFKDVNNILMKISYSFGIAFI
LLSILGIVILGEINITSILAGIFIIYLSYNERRKVMYIIMGDITKKRERLINKKYIDSRVTSVYCEQDMVNLLRIIDKNR
FNIFYVLDEEMNLLYVLRENEIIETLKTIGNINLREYYIKYRKE
>Mature_284_residues
MKIDKKIIIQLVTFFILGFKFNLALAFFWIIIHELAHYFVLLKLNIESEKFKLHILGARLEIKDYEDLSSRDKLIVCFAG
PILNGIVAMIFFCIYKLILKSEYIYSTYEINLVLFIFNLLPTYPLDGGKILGAILEEKMIFKDVNNILMKISYSFGIAFI
LLSILGIVILGEINITSILAGIFIIYLSYNERRKVMYIIMGDITKKRERLINKKYIDSRVTSVYCEQDMVNLLRIIDKNR
FNIFYVLDEEMNLLYVLRENEIIETLKTIGNINLREYYIKYRKE

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33477; Mature: 33477

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDKKIIIQLVTFFILGFKFNLALAFFWIIIHELAHYFVLLKLNIESEKFKLHILGARL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEEEEEEE
EIKDYEDLSSRDKLIVCFAGPILNGIVAMIFFCIYKLILKSEYIYSTYEINLVLFIFNLL
EECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
PTYPLDGGKILGAILEEKMIFKDVNNILMKISYSFGIAFILLSILGIVILGEINITSILA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GIFIIYLSYNERRKVMYIIMGDITKKRERLINKKYIDSRVTSVYCEQDMVNLLRIIDKNR
HHHHEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FNIFYVLDEEMNLLYVLRENEIIETLKTIGNINLREYYIKYRKE
EEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCHHHHHHEECCC
>Mature Secondary Structure
MKIDKKIIIQLVTFFILGFKFNLALAFFWIIIHELAHYFVLLKLNIESEKFKLHILGARL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEEEEEEE
EIKDYEDLSSRDKLIVCFAGPILNGIVAMIFFCIYKLILKSEYIYSTYEINLVLFIFNLL
EECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHH
PTYPLDGGKILGAILEEKMIFKDVNNILMKISYSFGIAFILLSILGIVILGEINITSILA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GIFIIYLSYNERRKVMYIIMGDITKKRERLINKKYIDSRVTSVYCEQDMVNLLRIIDKNR
HHHHEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FNIFYVLDEEMNLLYVLRENEIIETLKTIGNINLREYYIKYRKE
EEEEEEEECCCCEEEEEECCHHHHHHHHHCCCCHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA