Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311039

Identifier: 18311039

GI number: 18311039

Start: 2350288

End: 2350662

Strand: Reverse

Name: 18311039

Synonym: CPE2057

Alternate gene names: NA

Gene position: 2350662-2350288 (Counterclockwise)

Preceding gene: 18311040

Following gene: 18311038

Centisome position: 77.54

GC content: 37.33

Gene sequence:

>375_bases
ATGTCAGATAAAGATTTAAACAAATGCTGCGGAGGTAACTGTGGTTGCGGAAGCGAAAAAGAAGAAAAGCATGAAGGATG
CGGATGTGGTGGACACGGTCACGATCATGGACATGACCATCATGAAGGATGCGGATGTGGAGATGAACATTTAGAGCATT
TCGTTGTAGATTTAGAAGATGAAGAAGGAAACACAATAACTTGCGATGTTATTGATGCTTTTGAATATAAAGATGAAGAG
TACGTTTTAGTACAACATCCTGATGAATCAGTTTACCTATTCAAATCTCAAGGTGAAGAAGGAGAATTAGTTCTTCCTTC
AGAAGAAGAGTTTGATGAAGTTGTTAAATTCTACGAAGAAAATGTAGCTGAATAA

Upstream 100 bases:

>100_bases
TTAAGAATATAATTAAAGATTATAAAGAAAATGCTTTTATTATTTTGTATTTAAGGTTACAATTAATATAAAGTAAATTT
TCCACAAGGGAGGAAAGATT

Downstream 100 bases:

>100_bases
TAAAAAAAGATGATGTTTTACATCATCTTTTTTTTAGTTTATAATATTTTTTATAAATTTTATTTGAAGTGTGGTGTATG
ACATGGAGAAATTAGCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSDKDLNKCCGGNCGCGSEKEEKHEGCGCGGHGHDHGHDHHEGCGCGDEHLEHFVVDLEDEEGNTITCDVIDAFEYKDEE
YVLVQHPDESVYLFKSQGEEGELVLPSEEEFDEVVKFYEENVAE

Sequences:

>Translated_124_residues
MSDKDLNKCCGGNCGCGSEKEEKHEGCGCGGHGHDHGHDHHEGCGCGDEHLEHFVVDLEDEEGNTITCDVIDAFEYKDEE
YVLVQHPDESVYLFKSQGEEGELVLPSEEEFDEVVKFYEENVAE
>Mature_123_residues
SDKDLNKCCGGNCGCGSEKEEKHEGCGCGGHGHDHGHDHHEGCGCGDEHLEHFVVDLEDEEGNTITCDVIDAFEYKDEEY
VLVQHPDESVYLFKSQGEEGELVLPSEEEFDEVVKFYEENVAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13824; Mature: 13693

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKDLNKCCGGNCGCGSEKEEKHEGCGCGGHGHDHGHDHHEGCGCGDEHLEHFVVDLED
CCCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEC
EEGNTITCDVIDAFEYKDEEYVLVQHPDESVYLFKSQGEEGELVLPSEEEFDEVVKFYEE
CCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHH
NVAE
HCCC
>Mature Secondary Structure 
SDKDLNKCCGGNCGCGSEKEEKHEGCGCGGHGHDHGHDHHEGCGCGDEHLEHFVVDLED
CCCCCHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHEEEEEEEC
EEGNTITCDVIDAFEYKDEEYVLVQHPDESVYLFKSQGEEGELVLPSEEEFDEVVKFYEE
CCCCEEEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHH
NVAE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA