Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311038

Identifier: 18311038

GI number: 18311038

Start: 2349564

End: 2350070

Strand: Reverse

Name: 18311038

Synonym: CPE2056

Alternate gene names: NA

Gene position: 2350070-2349564 (Counterclockwise)

Preceding gene: 18311039

Following gene: 18311036

Centisome position: 77.52

GC content: 24.26

Gene sequence:

>507_bases
ATGTATGGATTAAAGTTTTATGATGAAAAAAAGGTTAAGCAATCATTTCTTAAATTTATAGATGGAGTAGAGGAGAATGA
TTTAAAAATCCTTGTGAAAAAATATTATGATGAGGTTTTAAGTAAGATAATTTATAAAGATTCTATTGATATGATGAAAA
AGTTAAAATCAGAAGGATATAAAATTTACTTAATATCAGCTTCACCAGAATTTTATTTAAATGAGCTTTATAATATAAAA
GAAGTAGATGTTATAATAGGAACAAGGTTCTCCTTTAATGAAGGAAAGTTTGAAAGAAAGATGTTAGGGGAGAACTGTAA
AGGGGAAGAAAAGGTTAGACGACTTAAGGAATACTTACAAGAACATAATATAGAGGTAGATTATAAAAACTCATATATGT
TTTCAGATTCACTTTCAGATAAACCTCTATTAGATTTAGTAGGAAATGCCTATTTAATAAATTATAAGAAAAATAATAAG
AATTATAAAATTTTAAATTGGAAATAA

Upstream 100 bases:

>100_bases
TTTAACTAGTAAGGAAACTTTACTACAGTTATTTAAATTTTTAATAAAAGAAGATAAGAAAAACTTAAGATTCTTACCAA
GAGCTGCTTTTTCAGGACTT

Downstream 100 bases:

>100_bases
AAAAGCAATCTCTATTTAGAGATTGCTTTTATTTTAATTAAAATTATTTACTAACTCTTGTTGTGATTATTTGAGTTAAT
GGTGGTACAACTTGTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: HAD-Superfamily Subfamily IB Hydrolase TIGR; Phosphoserine Phosphatase; HAD-Superfamily Subfamily IB Hydrolase; HAD-Superfamily Hydrolase; Phosphoserine Phosphatase Family Protein; Hydrolase; Phosphoserine Phosphatase-Like Protein; HAD Hydrolase Family IB

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGYKIYLISASPEFYLNELYNIK
EVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQEHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNK
NYKILNWK

Sequences:

>Translated_168_residues
MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGYKIYLISASPEFYLNELYNIK
EVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQEHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNK
NYKILNWK
>Mature_168_residues
MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGYKIYLISASPEFYLNELYNIK
EVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQEHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNK
NYKILNWK

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20135; Mature: 20135

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGY
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCE
KIYLISASPEFYLNELYNIKEVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQ
EEEEEECCCHHHHHHHCCCEEEEEEEECEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHH
EHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNKNYKILNWK
HCCCEEEECCCEEECCCCCCCHHHHHCCCEEEEEEEECCCCEEEEECC
>Mature Secondary Structure
MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGY
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCE
KIYLISASPEFYLNELYNIKEVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQ
EEEEEECCCHHHHHHHCCCEEEEEEEECEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHH
EHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNKNYKILNWK
HCCCEEEECCCEEECCCCCCCHHHHHCCCEEEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA