| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311038
Identifier: 18311038
GI number: 18311038
Start: 2349564
End: 2350070
Strand: Reverse
Name: 18311038
Synonym: CPE2056
Alternate gene names: NA
Gene position: 2350070-2349564 (Counterclockwise)
Preceding gene: 18311039
Following gene: 18311036
Centisome position: 77.52
GC content: 24.26
Gene sequence:
>507_bases ATGTATGGATTAAAGTTTTATGATGAAAAAAAGGTTAAGCAATCATTTCTTAAATTTATAGATGGAGTAGAGGAGAATGA TTTAAAAATCCTTGTGAAAAAATATTATGATGAGGTTTTAAGTAAGATAATTTATAAAGATTCTATTGATATGATGAAAA AGTTAAAATCAGAAGGATATAAAATTTACTTAATATCAGCTTCACCAGAATTTTATTTAAATGAGCTTTATAATATAAAA GAAGTAGATGTTATAATAGGAACAAGGTTCTCCTTTAATGAAGGAAAGTTTGAAAGAAAGATGTTAGGGGAGAACTGTAA AGGGGAAGAAAAGGTTAGACGACTTAAGGAATACTTACAAGAACATAATATAGAGGTAGATTATAAAAACTCATATATGT TTTCAGATTCACTTTCAGATAAACCTCTATTAGATTTAGTAGGAAATGCCTATTTAATAAATTATAAGAAAAATAATAAG AATTATAAAATTTTAAATTGGAAATAA
Upstream 100 bases:
>100_bases TTTAACTAGTAAGGAAACTTTACTACAGTTATTTAAATTTTTAATAAAAGAAGATAAGAAAAACTTAAGATTCTTACCAA GAGCTGCTTTTTCAGGACTT
Downstream 100 bases:
>100_bases AAAAGCAATCTCTATTTAGAGATTGCTTTTATTTTAATTAAAATTATTTACTAACTCTTGTTGTGATTATTTGAGTTAAT GGTGGTACAACTTGTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: HAD-Superfamily Subfamily IB Hydrolase TIGR; Phosphoserine Phosphatase; HAD-Superfamily Subfamily IB Hydrolase; HAD-Superfamily Hydrolase; Phosphoserine Phosphatase Family Protein; Hydrolase; Phosphoserine Phosphatase-Like Protein; HAD Hydrolase Family IB
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGYKIYLISASPEFYLNELYNIK EVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQEHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNK NYKILNWK
Sequences:
>Translated_168_residues MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGYKIYLISASPEFYLNELYNIK EVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQEHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNK NYKILNWK >Mature_168_residues MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGYKIYLISASPEFYLNELYNIK EVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQEHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNK NYKILNWK
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20135; Mature: 20135
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGY CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCE KIYLISASPEFYLNELYNIKEVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQ EEEEEECCCHHHHHHHCCCEEEEEEEECEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHH EHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNKNYKILNWK HCCCEEEECCCEEECCCCCCCHHHHHCCCEEEEEEEECCCCEEEEECC >Mature Secondary Structure MYGLKFYDEKKVKQSFLKFIDGVEENDLKILVKKYYDEVLSKIIYKDSIDMMKKLKSEGY CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCE KIYLISASPEFYLNELYNIKEVDVIIGTRFSFNEGKFERKMLGENCKGEEKVRRLKEYLQ EEEEEECCCHHHHHHHCCCEEEEEEEECEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHH EHNIEVDYKNSYMFSDSLSDKPLLDLVGNAYLINYKKNNKNYKILNWK HCCCEEEECCCEEECCCCCCCHHHHHCCCEEEEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA