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The map label for this gene is yqeV [H]

Identifier: 18311007

GI number: 18311007

Start: 2315997

End: 2317301

Strand: Reverse

Name: yqeV [H]

Synonym: CPE2025

Alternate gene names: 18311007

Gene position: 2317301-2315997 (Counterclockwise)

Preceding gene: 18311008

Following gene: 18311006

Centisome position: 76.44

GC content: 30.8

Gene sequence:

>1305_bases
ATGAAAGTTGCATTTGCTACACTAGGGTGTAGAGTTAATACATATGAATCAGAAGCGATGACTGAAAAATTTGTTAGGGA
AGGCTATGAAGTTGTAGATTTTAATGAAATGGCAGATGTGTATGTAGTTAATACTTGTAGCGTAACTAACATGGGAGATA
AGAAATCAAGACAAATAATAGGAAGAGCTAGAAGACAAAATCCAGAGGCTATTATAGCTGTAGTTGGATGTTATGCTCAA
ATAGCACCTACAGAGGTTTCAGGAATTGAAGGTGTAGATGTAGTTTTAGGTTCAAGAAATAAAGGTGAAATAGTTTATTA
TGTAAATAAGGCTAGAGATGAAGGCAAGCAACAAGTTAAGGTTGGCGCTGTTTTAAAGAATAAAGTTTTTGAGGACCTAA
AAATTGAAGAGTATAATAATAAAACTAGAGCTTTCTTAAAAATACAAGATGGATGTAATAGATTCTGTGCTTATTGCTTA
ATTCCATATACTAGGGGTTCTGTTTGTTCAAAAGACCCTAAGAAGGTTTTAGATGAAATAAGAAGTTTAGCAGAGCATGG
ATTTAAAGAAATAATATTATCAGGAATTCATACAGCATCTTATGGCGTTGATTTAGATGAAAAAGTAACATTAGTTGATT
TACTAGAAGAGATAGAAAAAATTGATGGAATAGAAAGAGTTAGAATAGGTTCAATAGATCCTACATTCTTTACAGAGGAT
GTTGTAAGAAGAATCTTAGCTCTTAAAAAACTATGTCCTCATTTCCACTTATCACTTCAAAGTGGATGTGATGCTACTTT
AAAAAGAATGAATAGAAGATACACTGCTAAAGAATATGAAGATATAGTAAATCTTTTAAGAGATAAAATAGAAGATGTTT
CTATAACAACAGACGTAATTGTTGGTTTCCCTGGAGAAACTGATGAAGAGTTTGAAGAAACTTACGAATTTTTAAAGAGA
ATAGCTCTTTCAAAAACTCACATATTCAAATATAGCCCTAGAAAAGGTACTAGAGCAGAGAATATGGAAAATCAAGTTGA
TGGAAATAAGAAAGATGAAAGAAGTAAAAAACTTATTGAATTAAATAGAATTAATGAAAAAGCCTTTGCTGAAAAATATA
TAGGTGAAGTTATTGATGTTTTATTTGAAGAAGAAGTTGAATTAGGAAGTGGAGTTTATACTGGATATACAAGAAATTAT
ATAAAGGTAAATGCCAAGGCTGATTGCAACGTTTCAGGTAAAATATTAAATGTAAAGATTAATTCTTTTGAGGGAGAAGT
AGCAGAGGGCGAAATAGTATTATAA

Upstream 100 bases:

>100_bases
TTGTAACTTTAGGACCAAGAATTTTAAGAACAGAGACAGCAGGATTTACCTGCATTTCTCTTATTCAGTATGAGCTTGGT
GATTTAGGAGGAAATATTTA

Downstream 100 bases:

>100_bases
AAAGAAGATTTTTACATTGAAAATGAGTTATAATAGATAATAGATTCATTGCTTAGGAGGTGAAAATCATGTCAGATTGT
ATTTTTTGCAAAATTGTAGC

Product: MiaB-like tRNA modifying protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKVAFATLGCRVNTYESEAMTEKFVREGYEVVDFNEMADVYVVNTCSVTNMGDKKSRQIIGRARRQNPEAIIAVVGCYAQ
IAPTEVSGIEGVDVVLGSRNKGEIVYYVNKARDEGKQQVKVGAVLKNKVFEDLKIEEYNNKTRAFLKIQDGCNRFCAYCL
IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSGIHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTED
VVRRILALKKLCPHFHLSLQSGCDATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKR
IALSKTHIFKYSPRKGTRAENMENQVDGNKKDERSKKLIELNRINEKAFAEKYIGEVIDVLFEEEVELGSGVYTGYTRNY
IKVNAKADCNVSGKILNVKINSFEGEVAEGEIVL

Sequences:

>Translated_434_residues
MKVAFATLGCRVNTYESEAMTEKFVREGYEVVDFNEMADVYVVNTCSVTNMGDKKSRQIIGRARRQNPEAIIAVVGCYAQ
IAPTEVSGIEGVDVVLGSRNKGEIVYYVNKARDEGKQQVKVGAVLKNKVFEDLKIEEYNNKTRAFLKIQDGCNRFCAYCL
IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSGIHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTED
VVRRILALKKLCPHFHLSLQSGCDATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKR
IALSKTHIFKYSPRKGTRAENMENQVDGNKKDERSKKLIELNRINEKAFAEKYIGEVIDVLFEEEVELGSGVYTGYTRNY
IKVNAKADCNVSGKILNVKINSFEGEVAEGEIVL
>Mature_434_residues
MKVAFATLGCRVNTYESEAMTEKFVREGYEVVDFNEMADVYVVNTCSVTNMGDKKSRQIIGRARRQNPEAIIAVVGCYAQ
IAPTEVSGIEGVDVVLGSRNKGEIVYYVNKARDEGKQQVKVGAVLKNKVFEDLKIEEYNNKTRAFLKIQDGCNRFCAYCL
IPYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSGIHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTED
VVRRILALKKLCPHFHLSLQSGCDATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVIVGFPGETDEEFEETYEFLKR
IALSKTHIFKYSPRKGTRAENMENQVDGNKKDERSKKLIELNRINEKAFAEKYIGEVIDVLFEEEVELGSGVYTGYTRNY
IKVNAKADCNVSGKILNVKINSFEGEVAEGEIVL

Specific function: Unknown

COG id: COG0621

COG function: function code J; 2-methylthioadenine synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

Organism=Homo sapiens, GI93277076, Length=449, Percent_Identity=26.5033407572383, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI28872784, Length=394, Percent_Identity=26.9035532994924, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI28872782, Length=394, Percent_Identity=26.9035532994924, Blast_Score=152, Evalue=4e-37,
Organism=Escherichia coli, GI1786882, Length=444, Percent_Identity=32.6576576576577, Blast_Score=217, Evalue=1e-57,
Organism=Escherichia coli, GI1787057, Length=404, Percent_Identity=29.7029702970297, Blast_Score=167, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17553146, Length=420, Percent_Identity=27.3809523809524, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI71996771, Length=365, Percent_Identity=26.3013698630137, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI19922432, Length=450, Percent_Identity=29.1111111111111, Blast_Score=166, Evalue=4e-41,
Organism=Drosophila melanogaster, GI21356207, Length=435, Percent_Identity=26.2068965517241, Blast_Score=155, Evalue=7e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR013848
- InterPro:   IPR006467
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]

EC number: NA

Molecular weight: Translated: 49112; Mature: 49112

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50926 TRAM ; PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAFATLGCRVNTYESEAMTEKFVREGYEVVDFNEMADVYVVNTCSVTNMGDKKSRQII
CEEEEEEECCEEECCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHH
GRARRQNPEAIIAVVGCYAQIAPTEVSGIEGVDVVLGSRNKGEIVYYVNKARDEGKQQVK
HHHHHCCCHHEEEEEHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHH
VGAVLKNKVFEDLKIEEYNNKTRAFLKIQDGCNRFCAYCLIPYTRGSVCSKDPKKVLDEI
HHHHHHHHHHHHCCHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RSLAEHGFKEIILSGIHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTED
HHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH
VVRRILALKKLCPHFHLSLQSGCDATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVI
HHHHHHHHHHHCCHHEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEE
VGFPGETDEEFEETYEFLKRIALSKTHIFKYSPRKGTRAENMENQVDGNKKDERSKKLIE
EECCCCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCHHCCHHHCCCCCCHHHHHHHHH
LNRINEKAFAEKYIGEVIDVLFEEEVELGSGVYTGYTRNYIKVNAKADCNVSGKILNVKI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCEEEEEEE
NSFEGEVAEGEIVL
ECCCCCCCCCCEEC
>Mature Secondary Structure
MKVAFATLGCRVNTYESEAMTEKFVREGYEVVDFNEMADVYVVNTCSVTNMGDKKSRQII
CEEEEEEECCEEECCHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHH
GRARRQNPEAIIAVVGCYAQIAPTEVSGIEGVDVVLGSRNKGEIVYYVNKARDEGKQQVK
HHHHHCCCHHEEEEEHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCHHHHH
VGAVLKNKVFEDLKIEEYNNKTRAFLKIQDGCNRFCAYCLIPYTRGSVCSKDPKKVLDEI
HHHHHHHHHHHHCCHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
RSLAEHGFKEIILSGIHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGSIDPTFFTED
HHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH
VVRRILALKKLCPHFHLSLQSGCDATLKRMNRRYTAKEYEDIVNLLRDKIEDVSITTDVI
HHHHHHHHHHHCCHHEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEE
VGFPGETDEEFEETYEFLKRIALSKTHIFKYSPRKGTRAENMENQVDGNKKDERSKKLIE
EECCCCCHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCHHCCHHHCCCCCCHHHHHHHHH
LNRINEKAFAEKYIGEVIDVLFEEEVELGSGVYTGYTRNYIKVNAKADCNVSGKILNVKI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCCCCCEEEEEEE
NSFEGEVAEGEIVL
ECCCCCCCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9023197; 9384377 [H]