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The map label for this gene is ycfF [C]

Identifier: 18311006

GI number: 18311006

Start: 2315584

End: 2315928

Strand: Reverse

Name: ycfF [C]

Synonym: CPE2024

Alternate gene names: 18311006

Gene position: 2315928-2315584 (Counterclockwise)

Preceding gene: 18311007

Following gene: 18311005

Centisome position: 76.4

GC content: 34.2

Gene sequence:

>345_bases
ATGTCAGATTGTATTTTTTGCAAAATTGTAGCTGGAGAAATTCCAAGCAAAAAGATTTATGAAGATGATAAAGTTTTAGC
TTTTCATGATATAAGTCCAGAAGCACCAGTACATTTTTTAGTTATTCCTAAAGAACACATAGCTAGTTTAAATGAAGTTA
ATGAAGAAAATGCAGAAGTATTTGCACACATTTTCAAGACTATTAATAAACTAGTAAAGGAACAAGAAGTTGCAGAGGAT
GGATACAGAGTTGTCACTAATTGCGGAGAGCAAGGAGGGCAAACAGTAGGACATATCCATTTCCACGTTCTTGGAGGAAG
AAATTTAAATTGGCCACCAGGCTAA

Upstream 100 bases:

>100_bases
GAGAAGTAGCAGAGGGCGAAATAGTATTATAAAAAGAAGATTTTTACATTGAAAATGAGTTATAATAGATAATAGATTCA
TTGCTTAGGAGGTGAAAATC

Downstream 100 bases:

>100_bases
AATTTAGATTTAACTTCTTGACATTAAAGAAAACTATGTTGTATAATATAGCGTGTGTTATTTAGCCCATGGCTGTGAAT
TACATTAATAATTTACGCTA

Product: HIT family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSDCIFCKIVAGEIPSKKIYEDDKVLAFHDISPEAPVHFLVIPKEHIASLNEVNEENAEVFAHIFKTINKLVKEQEVAED
GYRVVTNCGEQGGQTVGHIHFHVLGGRNLNWPPG

Sequences:

>Translated_114_residues
MSDCIFCKIVAGEIPSKKIYEDDKVLAFHDISPEAPVHFLVIPKEHIASLNEVNEENAEVFAHIFKTINKLVKEQEVAED
GYRVVTNCGEQGGQTVGHIHFHVLGGRNLNWPPG
>Mature_113_residues
SDCIFCKIVAGEIPSKKIYEDDKVLAFHDISPEAPVHFLVIPKEHIASLNEVNEENAEVFAHIFKTINKLVKEQEVAEDG
YRVVTNCGEQGGQTVGHIHFHVLGGRNLNWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=113, Percent_Identity=49.5575221238938, Blast_Score=123, Evalue=3e-29,
Organism=Homo sapiens, GI14211923, Length=113, Percent_Identity=43.3628318584071, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787346, Length=107, Percent_Identity=45.7943925233645, Blast_Score=100, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=51.3274336283186, Blast_Score=127, Evalue=9e-31,
Organism=Saccharomyces cerevisiae, GI6320078, Length=115, Percent_Identity=39.1304347826087, Blast_Score=75, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28574010, Length=112, Percent_Identity=51.7857142857143, Blast_Score=125, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=51.7857142857143, Blast_Score=124, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12706; Mature: 12574

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCIFCKIVAGEIPSKKIYEDDKVLAFHDISPEAPVHFLVIPKEHIASLNEVNEENAEV
CCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHCCCHHHHH
FAHIFKTINKLVKEQEVAEDGYRVVTNCGEQGGQTVGHIHFHVLGGRNLNWPPG
HHHHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SDCIFCKIVAGEIPSKKIYEDDKVLAFHDISPEAPVHFLVIPKEHIASLNEVNEENAEV
CCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECHHHHHHHHHCCCHHHHH
FAHIFKTINKLVKEQEVAEDGYRVVTNCGEQGGQTVGHIHFHVLGGRNLNWPPG
HHHHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]