| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is dgkA [H]
Identifier: 18310999
GI number: 18310999
Start: 2309820
End: 2310518
Strand: Reverse
Name: dgkA [H]
Synonym: CPE2017
Alternate gene names: 18310999
Gene position: 2310518-2309820 (Counterclockwise)
Preceding gene: 18311000
Following gene: 18310998
Centisome position: 76.22
GC content: 31.04
Gene sequence:
>699_bases ATGAAGGTAAGAAAACTTATTGATAGCTTTAATTATGCAATAGATGGTATAATATATGCCTTAAGAACTCAAAGAAACAT GAGAATACATTTTATAGTAGCTTTAATTATATTATCAGCTTGTTTTGTTTATGATATAAGCAAAATAGAGTTTATAATAC TAGCCATAACAATAACCATGGTAATAGCAGCAGAATTAGTTAATACTGCTATAGAAAGCGCTATAGATCTAAGTACAAAT TACTATCATCCTTTAGCTAAAATAGCTAAAAATACAGCAGCTGGGGCAGTACTTATAACTGCAATAAATTCTGTCTTAGT GGGGTATATTATATTTTGGGATGAGCTTACCAATATAACTTTTAGAATTATGGATAGAGTAAAAGAAACAGAGCCTTATA TTATATTTATTGTATTAGCCATAGTATGCATAGTTGTGGTTGCTGCAAAGGCTTATTTTGGAGAAGGAACCCCATTAAAG GGTGGAATGCCTTCAGGACACAGTGCTATAGCCTTTTCTATAGCTACGGCTATATCACTTATAAGTAATTCTCATATTAT AATTATACTTAGTTATTTAATGGCTTTAATAACGGCCCAGAGCAGAGTGGATTCAGAAGTCCATAGCGTATGGGAAGTTA TTGCAGGAGCAATATTAGGAACGCTTATAACAATTTTAATTTTTAAAATATTTAGTTGA
Upstream 100 bases:
>100_bases GGAAGAAAAAGCTAGAATGAGAGGAAGAGAAGAGGAGTTACTTGGTAAGTTAAATATAACAAGGGAAAGCTAAGGTATGA GAATGGTTTAGGAGAATATT
Downstream 100 bases:
>100_bases TAAATTTTTAGTATTTAAATTTTAGGATGGAGGATGAGTTATTATGAAAAAAGAACTTATAAAAAAAGCTTTAGAGGCAA GAGAATTGGCATATTGTCCA
Product: diacylglycerol kinase/PAP2 family protein
Products: NA
Alternate protein names: UdpK [H]
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MKVRKLIDSFNYAIDGIIYALRTQRNMRIHFIVALIILSACFVYDISKIEFIILAITITMVIAAELVNTAIESAIDLSTN YYHPLAKIAKNTAAGAVLITAINSVLVGYIIFWDELTNITFRIMDRVKETEPYIIFIVLAIVCIVVVAAKAYFGEGTPLK GGMPSGHSAIAFSIATAISLISNSHIIIILSYLMALITAQSRVDSEVHSVWEVIAGAILGTLITILIFKIFS
Sequences:
>Translated_232_residues MKVRKLIDSFNYAIDGIIYALRTQRNMRIHFIVALIILSACFVYDISKIEFIILAITITMVIAAELVNTAIESAIDLSTN YYHPLAKIAKNTAAGAVLITAINSVLVGYIIFWDELTNITFRIMDRVKETEPYIIFIVLAIVCIVVVAAKAYFGEGTPLK GGMPSGHSAIAFSIATAISLISNSHIIIILSYLMALITAQSRVDSEVHSVWEVIAGAILGTLITILIFKIFS >Mature_232_residues MKVRKLIDSFNYAIDGIIYALRTQRNMRIHFIVALIILSACFVYDISKIEFIILAITITMVIAAELVNTAIESAIDLSTN YYHPLAKIAKNTAAGAVLITAINSVLVGYIIFWDELTNITFRIMDRVKETEPYIIFIVLAIVCIVVVAAKAYFGEGTPLK GGMPSGHSAIAFSIATAISLISNSHIIIILSYLMALITAQSRVDSEVHSVWEVIAGAILGTLITILIFKIFS
Specific function: Catalyzes the phosphorylation of undecaprenol, which is probably the primary physiological substrate. Is also able to phosphorylate diacylglycerol, albeit with very low efficiency. May play a role in adaptability to environmental stress conditions such as
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.66 [H]
Molecular weight: Translated: 25443; Mature: 25443
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRKLIDSFNYAIDGIIYALRTQRNMRIHFIVALIILSACFVYDISKIEFIILAITITM CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAAELVNTAIESAIDLSTNYYHPLAKIAKNTAAGAVLITAINSVLVGYIIFWDELTNIT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FRIMDRVKETEPYIIFIVLAIVCIVVVAAKAYFGEGTPLKGGMPSGHSAIAFSIATAISL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH ISNSHIIIILSYLMALITAQSRVDSEVHSVWEVIAGAILGTLITILIFKIFS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVRKLIDSFNYAIDGIIYALRTQRNMRIHFIVALIILSACFVYDISKIEFIILAITITM CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAAELVNTAIESAIDLSTNYYHPLAKIAKNTAAGAVLITAINSVLVGYIIFWDELTNIT HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH FRIMDRVKETEPYIIFIVLAIVCIVVVAAKAYFGEGTPLKGGMPSGHSAIAFSIATAISL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH ISNSHIIIILSYLMALITAQSRVDSEVHSVWEVIAGAILGTLITILIFKIFS HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8407794; 9422608; 12397186 [H]