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The map label for this gene is ybeY [C]

Identifier: 18311000

GI number: 18311000

Start: 2310546

End: 2311052

Strand: Reverse

Name: ybeY [C]

Synonym: CPE2018

Alternate gene names: 18311000

Gene position: 2311052-2310546 (Counterclockwise)

Preceding gene: 18311001

Following gene: 18310999

Centisome position: 76.24

GC content: 29.98

Gene sequence:

>507_bases
ATGATATTCATAGATAATAGACAGAATAAATTTGATGTTACGGAAGAATTAACTACGAAGTTAGAAGAAGTTATTTCTTT
TGTGCTAAAAGAAGAAAAAGTTAAAGAGGATTGTGAAGTTTCTTTAGTTTTTGTAGACAACGAAGAAATTAGAGGAATAA
ACAATGAAACTAGAGGAATAGATAAAGCAACTGATGTTTTATCATTTCCAATGATTGATTATCCAGAGGACAAAGTCTAT
AAAGATGTTTATTTAGAGCATGAATTTGATAAATGCTATTTTGATGGAGATGAACTTATTTTAGGAGATATAGTTTTATC
TCTAGAAAGAACTAAAGAACAAAGTATTGAGTTTAATCACTCATTTGAAAGAGAGGCTTGCTACTTAGTAACTCACTCAG
TTTTACACCTTTTAGGTTATGACCATATGGAAGAGGAAGAAAAAGCTAGAATGAGAGGAAGAGAAGAGGAGTTACTTGGT
AAGTTAAATATAACAAGGGAAAGCTAA

Upstream 100 bases:

>100_bases
GATATAAGTAAGATAAAAAAATGTTTCCTAAAGGCATTAAATGGAATACATCATGAAAGAATAGAATATCCAGATGATAA
CAAGAAGGAGAAAAAATAAA

Downstream 100 bases:

>100_bases
GGTATGAGAATGGTTTAGGAGAATATTATGAAGGTAAGAAAACTTATTGATAGCTTTAATTATGCAATAGATGGTATAAT
ATATGCCTTAAGAACTCAAA

Product: putative metalloprotease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIFIDNRQNKFDVTEELTTKLEEVISFVLKEEKVKEDCEVSLVFVDNEEIRGINNETRGIDKATDVLSFPMIDYPEDKVY
KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGREEELLG
KLNITRES

Sequences:

>Translated_168_residues
MIFIDNRQNKFDVTEELTTKLEEVISFVLKEEKVKEDCEVSLVFVDNEEIRGINNETRGIDKATDVLSFPMIDYPEDKVY
KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGREEELLG
KLNITRES
>Mature_168_residues
MIFIDNRQNKFDVTEELTTKLEEVISFVLKEEKVKEDCEVSLVFVDNEEIRGINNETRGIDKATDVLSFPMIDYPEDKVY
KDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGREEELLG
KLNITRES

Specific function: Involved in rRNA and/or ribosome maturation and assembly. Required for normal 5' and 3' processing of 16S, 23S and 5S rRNAs. May have metal-dependent hydrolase activity [H]

COG id: COG0319

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rRNA maturation factor YbeY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023091
- InterPro:   IPR020549
- InterPro:   IPR002036 [H]

Pfam domain/function: PF02130 UPF0054 [H]

EC number: NA

Molecular weight: Translated: 19837; Mature: 19837

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS01306 UPF0054

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFIDNRQNKFDVTEELTTKLEEVISFVLKEEKVKEDCEVSLVFVDNEEIRGINNETRGI
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCCC
DKATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNH
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCCCC
SFEREACYLVTHSVLHLLGYDHMEEEEKARMRGREEELLGKLNITRES
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MIFIDNRQNKFDVTEELTTKLEEVISFVLKEEKVKEDCEVSLVFVDNEEIRGINNETRGI
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCCCCCCC
DKATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYFDGDELILGDIVLSLERTKEQSIEFNH
HHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCCCCC
SFEREACYLVTHSVLHLLGYDHMEEEEKARMRGREEELLGKLNITRES
CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA