Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310840

Identifier: 18310840

GI number: 18310840

Start: 2126479

End: 2127225

Strand: Reverse

Name: 18310840

Synonym: CPE1858

Alternate gene names: NA

Gene position: 2127225-2126479 (Counterclockwise)

Preceding gene: 18310841

Following gene: 18310839

Centisome position: 70.17

GC content: 24.5

Gene sequence:

>747_bases
ATGAGTACGAACATAAATGAATATATACAAAAAAAGAAAAGAAAAAAGACAAGAAAGAAAATTATCTTAGTTAGTATAAT
ACTTATTGTTATATTAGGATTAATTTTAATTAAGACACCTTATTTTAATATAAAAAAGGTTAATGTTAATAATAATAATG
TTATAACTAAAGAGAGTGTAATAGGAGAAAATGATATTTTAAATCAAAATATATTCTTGCTTAATACTTCTGCTCTTAAG
AAAAAAATATTAAGTAATCCATATGTAAAAAGCGTTAAAATATCAAGAAAGCTTCCAGATCAATTAAGTATAAATGTAGT
TGAAAGAAATGCTACATTTATTGTTAATGAGGGTACTGATTTTTATGTTTTAAATGAAAATTTAGTCATAATGGAGAAGA
AAAATTCAGAAGAAGGGCTACAATTGCCTACAGTAACGGGATTAACTGTAGAAAACAGATTCTTAGGGGAACCTATGAGT
ACAGATAAGGATAAAGTTGAGGTTTTAAAAGAGATTGGAGAAGCTTTAAATAAAAGTAAAATAAAAGTAAACTCTGTAGA
TATATCTAACCTTAATAATATTGTTATAAATAAGGGCGAGGTTCAAATACTTTTAGGAAATTCAGATAAATTAAGTGATA
AGTTAACTAAGATGGTTAATATATTAAATGATCCAGCAGGAAATTTTGAAAAGGGATATATAAACATAAGCTTTAATGGG
AATCCTGTAATATATAAAGAAAAGTAA

Upstream 100 bases:

>100_bases
TTTTTACTATTAGTAATATTTTCTTAAAAACTTAATGAAAAAAATCTAGTAAAATGATATTATTGTTATTGAAATGCAAA
ATAAAGAAATAAGGAGTAAT

Downstream 100 bases:

>100_bases
GGAGGAGTGCTTTTTGAAGAAGTTGTCTTCACAAATTATTATAGGTATAGTTTGTGCTTTGTTAGGGTTTTTATTAACCT
ACCAATTTAAAATTATAAAT

Product: cell division protein FtsQ

Products: NA

Alternate protein names: Polypeptide-Transport-Associated Domain-Containing Protein; Septal Protein DivIB/FtsQ; POTRA Domain-Containing Protein FtsQ-Type

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSTNINEYIQKKKRKKTRKKIILVSIILIVILGLILIKTPYFNIKKVNVNNNNVITKESVIGENDILNQNIFLLNTSALK
KKILSNPYVKSVKISRKLPDQLSINVVERNATFIVNEGTDFYVLNENLVIMEKKNSEEGLQLPTVTGLTVENRFLGEPMS
TDKDKVEVLKEIGEALNKSKIKVNSVDISNLNNIVINKGEVQILLGNSDKLSDKLTKMVNILNDPAGNFEKGYINISFNG
NPVIYKEK

Sequences:

>Translated_248_residues
MSTNINEYIQKKKRKKTRKKIILVSIILIVILGLILIKTPYFNIKKVNVNNNNVITKESVIGENDILNQNIFLLNTSALK
KKILSNPYVKSVKISRKLPDQLSINVVERNATFIVNEGTDFYVLNENLVIMEKKNSEEGLQLPTVTGLTVENRFLGEPMS
TDKDKVEVLKEIGEALNKSKIKVNSVDISNLNNIVINKGEVQILLGNSDKLSDKLTKMVNILNDPAGNFEKGYINISFNG
NPVIYKEK
>Mature_247_residues
STNINEYIQKKKRKKTRKKIILVSIILIVILGLILIKTPYFNIKKVNVNNNNVITKESVIGENDILNQNIFLLNTSALKK
KILSNPYVKSVKISRKLPDQLSINVVERNATFIVNEGTDFYVLNENLVIMEKKNSEEGLQLPTVTGLTVENRFLGEPMST
DKDKVEVLKEIGEALNKSKIKVNSVDISNLNNIVINKGEVQILLGNSDKLSDKLTKMVNILNDPAGNFEKGYINISFNGN
PVIYKEK

Specific function: Unknown

COG id: COG1589

COG function: function code M; Cell division septal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27944; Mature: 27813

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTNINEYIQKKKRKKTRKKIILVSIILIVILGLILIKTPYFNIKKVNVNNNNVITKESV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHH
IGENDILNQNIFLLNTSALKKKILSNPYVKSVKISRKLPDQLSINVVERNATFIVNEGTD
CCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCEEEEEECCCE
FYVLNENLVIMEKKNSEEGLQLPTVTGLTVENRFLGEPMSTDKDKVEVLKEIGEALNKSK
EEEECCCEEEEECCCCCCCCCCCEEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
IKVNSVDISNLNNIVINKGEVQILLGNSDKLSDKLTKMVNILNDPAGNFEKGYINISFNG
EEEEEEECCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
NPVIYKEK
CEEEEECC
>Mature Secondary Structure 
STNINEYIQKKKRKKTRKKIILVSIILIVILGLILIKTPYFNIKKVNVNNNNVITKESV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEHHHH
IGENDILNQNIFLLNTSALKKKILSNPYVKSVKISRKLPDQLSINVVERNATFIVNEGTD
CCCCCCCCCEEEEEEHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEECCEEEEEECCCE
FYVLNENLVIMEKKNSEEGLQLPTVTGLTVENRFLGEPMSTDKDKVEVLKEIGEALNKSK
EEEECCCEEEEECCCCCCCCCCCEEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
IKVNSVDISNLNNIVINKGEVQILLGNSDKLSDKLTKMVNILNDPAGNFEKGYINISFNG
EEEEEEECCCCCEEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
NPVIYKEK
CEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA