Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 18310797

GI number: 18310797

Start: 2093294

End: 2094991

Strand: Reverse

Name: recN [H]

Synonym: CPE1815

Alternate gene names: 18310797

Gene position: 2094991-2093294 (Counterclockwise)

Preceding gene: 18310798

Following gene: 18310796

Centisome position: 69.11

GC content: 27.09

Gene sequence:

>1698_bases
ATGCTTTTACAATTAACTATAAATAACTTTGCTTTGATAGAAAAAGCATCTTTAGATTTTAAAGAAGGATTCACTATTTT
ATCAGGAGAAACTGGAGCTGGTAAGTCTATTCTTATAGATGCGATAAATTATGTTCAAGGAAGTAAGTTTAACAAGGACT
TAATTAGAACTGGAGAAGAAAAGACTTTTGTAGAGGCTATATTTTCAATAGATGATAATGAGAGGCTTAAAGAAATTTTA
GATGATTTAGAAATAGAGTATGATGATACTTTAATAATTTCTAGAGAAACTTTTATAAACGGTAGAAGTAATATAAAGGT
TAATGGAAGAAGTATAATAGTAGCTACTTTAAAAAAAATAAGTAGCACACTTCTAGACATACATGGTCAACATAACAATC
AAAATTTATTAAATAAAGAAAAGCATATAATGTATTTAGATGATTTTGGAGATTCTAAGTTAAGTGAAGATTTAAAAGAA
TATGGAGAAAAATTCTCAGAGCTTAAGGATATAGAAAGAAAAATAAGTGAATTAAGCAATGAAGGAAAAGATGAAAAACT
TTTAAATTATTTAGAATATCAGTTAAATGAAATTGAGGAAGCCAAGCTTAGAAATGGTGAAGAAGAAGAGTTAACAGAAA
GATTTAATGTTTTATCTAATGCAGAAAAAATAAAAAATTCACTGGGAATATCATATAATCTATTAAATGGTATTGAAAGC
AGTGTAGTGGATTCTTTATCAGTAGTAAATAGGGAGCTTTCAAATGTTGAAGAGCATTTAGAAAAAATCAAAAATATAAA
CTCTAAAATAATGGAAATGTATTATGAAATACAAGAAATGGCTAGAGAAATTAGAGATATATGTGACGAAAGTGTTTATG
ATGGTAATGAATTAGAAGAAATAAATAGCCGTATGTTTAAGATTGCTTCCTTAAAGAAGAAGTATGGAAACAGTATAGCC
GAAATCTTAGAATATAAAAATAATATTTTATCTCAAATAAATAATATTAAAAACTCAGAAAAAATAATTGAAGATCTTTT
AAATGAAAAAAGTAAAGTTGAGAATGTTTTAAGTGAAATAGCTAATAGAATTCATAATAAGAGAATAGAACTTTCAAAAG
TTTTAGAAGAAAATATCCATAAAGAACTGGCCTATGTTGGCTTAGGAAAATGTAGATTTGAAGTTCTTATTGAGGAAGAT
GAAACCTTTAACTTTAAAGGTAAGGACAAAGTACAATTTCTTATATCAACAAATCCTGGTGAACCTTTAAAGCCTATGGA
AAGAATAGTTTCTGGAGGAGAACTTTCAAGAATAATGTTAGCTTTAAAAGCTGTGTTTATAGATAAGGATAAGATTCCTA
CAGTTATATTTGATGAAATAGACACAGGTATAAGTGGAAGAGTAGCTCAATCCGTTGGAGAAAAGATGTATGAAATATCA
ACAAAACATCAAGTTTTTTGTATCACACATCTTCCTCAAATAGCAAGTATGTCGGACAATCATTATATGGTTAGGAAAAA
AGTAATAGATAATAAAACTTTTTCAAAGGTTGAACCTATAACTTATAATCAAAAAATTGAAGAGGTTGGAAAAATGCTAG
GTGGCGTTGAAATGACAAGCAATACATTATTAAATGCTAAAGAGATGATAGAGTTAGCTGATACAAAAAAAGAAACAATT
AAGACTTTTCATACATAA

Upstream 100 bases:

>100_bases
AGGCAACACAATATTTATATTAGTTAGAAGCTTAGAAAAAGCAGAAACTCTAGTTTCTAGGATACTGGAAATGATAGAAG
GATAGTTAAGGAGGAGAAGT

Downstream 100 bases:

>100_bases
TAAAGTGATTTTTAATACAAAATAGAACTGTTAAACAGTTCTATTTTTTTTTATTTTAAAACTAATATGAGAATTTTAGT
ATATTTTAAATTGATTTGGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MLLQLTINNFALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGSKFNKDLIRTGEEKTFVEAIFSIDDNERLKEIL
DDLEIEYDDTLIISRETFINGRSNIKVNGRSIIVATLKKISSTLLDIHGQHNNQNLLNKEKHIMYLDDFGDSKLSEDLKE
YGEKFSELKDIERKISELSNEGKDEKLLNYLEYQLNEIEEAKLRNGEEEELTERFNVLSNAEKIKNSLGISYNLLNGIES
SVVDSLSVVNRELSNVEEHLEKIKNINSKIMEMYYEIQEMAREIRDICDESVYDGNELEEINSRMFKIASLKKKYGNSIA
EILEYKNNILSQINNIKNSEKIIEDLLNEKSKVENVLSEIANRIHNKRIELSKVLEENIHKELAYVGLGKCRFEVLIEED
ETFNFKGKDKVQFLISTNPGEPLKPMERIVSGGELSRIMLALKAVFIDKDKIPTVIFDEIDTGISGRVAQSVGEKMYEIS
TKHQVFCITHLPQIASMSDNHYMVRKKVIDNKTFSKVEPITYNQKIEEVGKMLGGVEMTSNTLLNAKEMIELADTKKETI
KTFHT

Sequences:

>Translated_565_residues
MLLQLTINNFALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGSKFNKDLIRTGEEKTFVEAIFSIDDNERLKEIL
DDLEIEYDDTLIISRETFINGRSNIKVNGRSIIVATLKKISSTLLDIHGQHNNQNLLNKEKHIMYLDDFGDSKLSEDLKE
YGEKFSELKDIERKISELSNEGKDEKLLNYLEYQLNEIEEAKLRNGEEEELTERFNVLSNAEKIKNSLGISYNLLNGIES
SVVDSLSVVNRELSNVEEHLEKIKNINSKIMEMYYEIQEMAREIRDICDESVYDGNELEEINSRMFKIASLKKKYGNSIA
EILEYKNNILSQINNIKNSEKIIEDLLNEKSKVENVLSEIANRIHNKRIELSKVLEENIHKELAYVGLGKCRFEVLIEED
ETFNFKGKDKVQFLISTNPGEPLKPMERIVSGGELSRIMLALKAVFIDKDKIPTVIFDEIDTGISGRVAQSVGEKMYEIS
TKHQVFCITHLPQIASMSDNHYMVRKKVIDNKTFSKVEPITYNQKIEEVGKMLGGVEMTSNTLLNAKEMIELADTKKETI
KTFHT
>Mature_565_residues
MLLQLTINNFALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGSKFNKDLIRTGEEKTFVEAIFSIDDNERLKEIL
DDLEIEYDDTLIISRETFINGRSNIKVNGRSIIVATLKKISSTLLDIHGQHNNQNLLNKEKHIMYLDDFGDSKLSEDLKE
YGEKFSELKDIERKISELSNEGKDEKLLNYLEYQLNEIEEAKLRNGEEEELTERFNVLSNAEKIKNSLGISYNLLNGIES
SVVDSLSVVNRELSNVEEHLEKIKNINSKIMEMYYEIQEMAREIRDICDESVYDGNELEEINSRMFKIASLKKKYGNSIA
EILEYKNNILSQINNIKNSEKIIEDLLNEKSKVENVLSEIANRIHNKRIELSKVLEENIHKELAYVGLGKCRFEVLIEED
ETFNFKGKDKVQFLISTNPGEPLKPMERIVSGGELSRIMLALKAVFIDKDKIPTVIFDEIDTGISGRVAQSVGEKMYEIS
TKHQVFCITHLPQIASMSDNHYMVRKKVIDNKTFSKVEPITYNQKIEEVGKMLGGVEMTSNTLLNAKEMIELADTKKETI
KTFHT

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=557, Percent_Identity=31.0592459605027, Blast_Score=294, Evalue=1e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 64657; Mature: 64657

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQLTINNFALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGSKFNKDLIRTGEE
CEEEEEECCEEEEECCCCCHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCH
KTFVEAIFSIDDNERLKEILDDLEIEYDDTLIISRETFINGRSNIKVNGRSIIVATLKKI
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCEEEECCCEEHHHHHHHH
SSTLLDIHGQHNNQNLLNKEKHIMYLDDFGDSKLSEDLKEYGEKFSELKDIERKISELSN
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGKDEKLLNYLEYQLNEIEEAKLRNGEEEELTERFNVLSNAEKIKNSLGISYNLLNGIES
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SVVDSLSVVNRELSNVEEHLEKIKNINSKIMEMYYEIQEMAREIRDICDESVYDGNELEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
INSRMFKIASLKKKYGNSIAEILEYKNNILSQINNIKNSEKIIEDLLNEKSKVENVLSEI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ANRIHNKRIELSKVLEENIHKELAYVGLGKCRFEVLIEEDETFNFKGKDKVQFLISTNPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCC
EPLKPMERIVSGGELSRIMLALKAVFIDKDKIPTVIFDEIDTGISGRVAQSVGEKMYEIS
CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHC
TKHQVFCITHLPQIASMSDNHYMVRKKVIDNKTFSKVEPITYNQKIEEVGKMLGGVEMTS
CCCEEEEEECCCHHHCCCCCCHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCHHCH
NTLLNAKEMIELADTKKETIKTFHT
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLLQLTINNFALIEKASLDFKEGFTILSGETGAGKSILIDAINYVQGSKFNKDLIRTGEE
CEEEEEECCEEEEECCCCCHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCH
KTFVEAIFSIDDNERLKEILDDLEIEYDDTLIISRETFINGRSNIKVNGRSIIVATLKKI
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEHHHHCCCCCEEEECCCEEHHHHHHHH
SSTLLDIHGQHNNQNLLNKEKHIMYLDDFGDSKLSEDLKEYGEKFSELKDIERKISELSN
HHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EGKDEKLLNYLEYQLNEIEEAKLRNGEEEELTERFNVLSNAEKIKNSLGISYNLLNGIES
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SVVDSLSVVNRELSNVEEHLEKIKNINSKIMEMYYEIQEMAREIRDICDESVYDGNELEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
INSRMFKIASLKKKYGNSIAEILEYKNNILSQINNIKNSEKIIEDLLNEKSKVENVLSEI
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ANRIHNKRIELSKVLEENIHKELAYVGLGKCRFEVLIEEDETFNFKGKDKVQFLISTNPG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCC
EPLKPMERIVSGGELSRIMLALKAVFIDKDKIPTVIFDEIDTGISGRVAQSVGEKMYEIS
CCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHC
TKHQVFCITHLPQIASMSDNHYMVRKKVIDNKTFSKVEPITYNQKIEEVGKMLGGVEMTS
CCCEEEEEECCCHHHCCCCCCHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHCCCHHCH
NTLLNAKEMIELADTKKETIKTFHT
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]