| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is argR
Identifier: 18310798
GI number: 18310798
Start: 2095007
End: 2095459
Strand: Reverse
Name: argR
Synonym: CPE1816
Alternate gene names: 18310798
Gene position: 2095459-2095007 (Counterclockwise)
Preceding gene: 18310799
Following gene: 18310797
Centisome position: 69.12
GC content: 30.91
Gene sequence:
>453_bases ATGAAATCTAAGAGACATTCTAAGATAATTGAAATTATAAAATCAACAGCGATAGAAACTCAAGAAGAGTTAGCGGAAGA ATTAAAAAAAGCTGGGTTTGATGTTACTCAAGCTACAGTATCTAGAGATATAAAAAATTTAAAACTTGTTAAAAAACAAG ATAATAAAGGACACTATAGATACACAATCATAGAAGAAGAAAAAAATGAAATGGTTGATAGATTAAGCAATATATTAGCC AATACTGTAACTTCAGTAGAAAATGTTGATAAGATGGTTGTTGTTAAAACAATATCAGGTTCAGCATCTGCAGCAGCAGA GGCAATAGATACCCTTCATTTAGGTGAAATTGCTGGTACTATAGCAGGAGGCAACACAATATTTATATTAGTTAGAAGCT TAGAAAAAGCAGAAACTCTAGTTTCTAGGATACTGGAAATGATAGAAGGATAG
Upstream 100 bases:
>100_bases GAATTTTTTAGAATAATTTCATTTGATAATAAAAGTTATTTTAAGGTACTAAGGAAAAAATTATTTAAGATAGAATAAAT ATTATGAAGGTGAGTTGAAG
Downstream 100 bases:
>100_bases TTAAGGAGGAGAAGTATGCTTTTACAATTAACTATAAATAACTTTGCTTTGATAGAAAAAGCATCTTTAGATTTTAAAGA AGGATTCACTATTTTATCAG
Product: arginine repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKSKRHSKIIEIIKSTAIETQEELAEELKKAGFDVTQATVSRDIKNLKLVKKQDNKGHYRYTIIEEEKNEMVDRLSNILA NTVTSVENVDKMVVVKTISGSASAAAEAIDTLHLGEIAGTIAGGNTIFILVRSLEKAETLVSRILEMIEG
Sequences:
>Translated_150_residues MKSKRHSKIIEIIKSTAIETQEELAEELKKAGFDVTQATVSRDIKNLKLVKKQDNKGHYRYTIIEEEKNEMVDRLSNILA NTVTSVENVDKMVVVKTISGSASAAAEAIDTLHLGEIAGTIAGGNTIFILVRSLEKAETLVSRILEMIEG >Mature_150_residues MKSKRHSKIIEIIKSTAIETQEELAEELKKAGFDVTQATVSRDIKNLKLVKKQDNKGHYRYTIIEEEKNEMVDRLSNILA NTVTSVENVDKMVVVKTISGSASAAAEAIDTLHLGEIAGTIAGGNTIFILVRSLEKAETLVSRILEMIEG
Specific function: Regulates arginine biosynthesis genes
COG id: COG1438
COG function: function code K; Arginine repressor
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgR family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ARGR2_CLOPE (P58685)
Other databases:
- EMBL: BA000016 - RefSeq: NP_562732.1 - ProteinModelPortal: P58685 - SMR: P58685 - GeneID: 990125 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE1816 - NMPDR: fig|195102.1.peg.1879 - HOGENOM: HBG697909 - OMA: VENVDKM - ProtClustDB: PRK00441 - BioCyc: CPER195102:CPE1816-MONOMER - GO: GO:0005737 - HAMAP: MF_00173 - InterPro: IPR001669 - InterPro: IPR020899 - InterPro: IPR020900 - InterPro: IPR011991 - Gene3D: G3DSA:3.30.1360.40 - Gene3D: G3DSA:1.10.10.10 - PRINTS: PR01467 - ProDom: PD007402 - TIGRFAMs: TIGR01529
Pfam domain/function: PF01316 Arg_repressor; PF02863 Arg_repressor_C; SSF55252 Arg_repress
EC number: NA
Molecular weight: Translated: 16526; Mature: 16526
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKRHSKIIEIIKSTAIETQEELAEELKKAGFDVTQATVSRDIKNLKLVKKQDNKGHYR CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE YTIIEEEKNEMVDRLSNILANTVTSVENVDKMVVVKTISGSASAAAEAIDTLHLGEIAGT EEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH IAGGNTIFILVRSLEKAETLVSRILEMIEG HCCCCEEEEHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSKRHSKIIEIIKSTAIETQEELAEELKKAGFDVTQATVSRDIKNLKLVKKQDNKGHYR CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE YTIIEEEKNEMVDRLSNILANTVTSVENVDKMVVVKTISGSASAAAEAIDTLHLGEIAGT EEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH IAGGNTIFILVRSLEKAETLVSRILEMIEG HCCCCEEEEHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842