Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310605

Identifier: 18310605

GI number: 18310605

Start: 1892881

End: 1893546

Strand: Direct

Name: 18310605

Synonym: CPE1623

Alternate gene names: NA

Gene position: 1892881-1893546 (Clockwise)

Preceding gene: 18310602

Following gene: 18310606

Centisome position: 62.44

GC content: 24.62

Gene sequence:

>666_bases
ATGACTAAAAAGAAAAAGAAACTTTTTATAGTTATATTATCAGTATTAATTTTAATATTAGCTTGTTTTTTTGGAGTAAA
AGCAGTTTATAAATCATATTTTGCTCCTAAAGTATCTGTAACCTCAATAAATTCTAACATAGAACTTAACGATTGGAATT
TAATAAAAAAATTCCTTCCTAACAATATAAATCTTTCTTTAAAAGAAATAAATGTTAGCTCTACAACTGAATTTTCTGAT
TCTGAATTAACAGATTTATTTATACTAGCTTTGCGTGAAGAACCTGATGCAATAAAAGATCTTACAGGATTAAAGGTTGA
TATAGAAAACGATGATATTAATATTTATGTAGATATAAACTATAAAGATATACCTTTCCAAGGAAAACTTACCTTTACAG
CTCAAAGTAAGGATGGTAAAGGAATATTCCACTATAAAGAAGGAAAGGTTGGTTTTATTGATATTTCTAAGGATACTATC
TTTAAAAACCTTCAAGATAATTCAATACTTTCCTTTGACAAAACTAATGGAGATATAATCCTTTCTTTTAAGGATATAAT
AAAATACCTTCAAATAAAATCTATAAAGGTAGAAAATAATAAAATAGTAATAGTATTTAATGGTACTATTCCTTTACTTA
GCTCAATCTTTCCAAACCTAAATTAA

Upstream 100 bases:

>100_bases
TATCTCCTTATCTGTTACTTTCATTTGAAAACAAGTGAAATTTAAATTAATTTAGTTTATAATTGAATTAATAAACTCTT
ATAGATGGGAGATAATTAAC

Downstream 100 bases:

>100_bases
AAAATGGCTTTATCAAAATATAATAATAAAACTTATAAACATATTCCGAGAATTACTAGATTTCGCTAAGAATTTATAAT
TATTACTCCGAAGATATTAC

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTKKKKKLFIVILSVLILILACFFGVKAVYKSYFAPKVSVTSINSNIELNDWNLIKKFLPNNINLSLKEINVSSTTEFSD
SELTDLFILALREEPDAIKDLTGLKVDIENDDINIYVDINYKDIPFQGKLTFTAQSKDGKGIFHYKEGKVGFIDISKDTI
FKNLQDNSILSFDKTNGDIILSFKDIIKYLQIKSIKVENNKIVIVFNGTIPLLSSIFPNLN

Sequences:

>Translated_221_residues
MTKKKKKLFIVILSVLILILACFFGVKAVYKSYFAPKVSVTSINSNIELNDWNLIKKFLPNNINLSLKEINVSSTTEFSD
SELTDLFILALREEPDAIKDLTGLKVDIENDDINIYVDINYKDIPFQGKLTFTAQSKDGKGIFHYKEGKVGFIDISKDTI
FKNLQDNSILSFDKTNGDIILSFKDIIKYLQIKSIKVENNKIVIVFNGTIPLLSSIFPNLN
>Mature_220_residues
TKKKKKLFIVILSVLILILACFFGVKAVYKSYFAPKVSVTSINSNIELNDWNLIKKFLPNNINLSLKEINVSSTTEFSDS
ELTDLFILALREEPDAIKDLTGLKVDIENDDINIYVDINYKDIPFQGKLTFTAQSKDGKGIFHYKEGKVGFIDISKDTIF
KNLQDNSILSFDKTNGDIILSFKDIIKYLQIKSIKVENNKIVIVFNGTIPLLSSIFPNLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25040; Mature: 24909

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKKKKLFIVILSVLILILACFFGVKAVYKSYFAPKVSVTSINSNIELNDWNLIKKFLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHCC
NNINLSLKEINVSSTTEFSDSELTDLFILALREEPDAIKDLTGLKVDIENDDINIYVDIN
CCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCEEEEECCCEEEEEEEC
YKDIPFQGKLTFTAQSKDGKGIFHYKEGKVGFIDISKDTIFKNLQDNSILSFDKTNGDII
CCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEECCHHHHHHCCCCCCEEEEECCCCCEE
LSFKDIIKYLQIKSIKVENNKIVIVFNGTIPLLSSIFPNLN
EEHHHHHHHHEEEEEEECCCEEEEEECCCHHHHHHHCCCCC
>Mature Secondary Structure 
TKKKKKLFIVILSVLILILACFFGVKAVYKSYFAPKVSVTSINSNIELNDWNLIKKFLP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHCC
NNINLSLKEINVSSTTEFSDSELTDLFILALREEPDAIKDLTGLKVDIENDDINIYVDIN
CCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCHHHHCCCCEEEEECCCEEEEEEEC
YKDIPFQGKLTFTAQSKDGKGIFHYKEGKVGFIDISKDTIFKNLQDNSILSFDKTNGDII
CCCCCCCCEEEEEEECCCCCEEEEEECCCEEEEECCHHHHHHCCCCCCEEEEECCCCCEE
LSFKDIIKYLQIKSIKVENNKIVIVFNGTIPLLSSIFPNLN
EEHHHHHHHHEEEEEEECCCEEEEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA