Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310603

Identifier: 18310603

GI number: 18310603

Start: 1890669

End: 1891475

Strand: Reverse

Name: 18310603

Synonym: CPE1621

Alternate gene names: NA

Gene position: 1891475-1890669 (Counterclockwise)

Preceding gene: 18310604

Following gene: 18310601

Centisome position: 62.4

GC content: 26.15

Gene sequence:

>807_bases
ATGATTTTATTTGATGGAATGTATTCCTTAGGTGGTGTAATTTTATCATTACTAGCCCTAATGGGAAGCATTTATATAAA
TAAAAAAGATTATGAGAAGTATCCCTTTGGTAAGAAGATGATAGAACCTTTAATAGTAATAATTAAATCCTTAGCAATTT
TTATTATGTGTATATATTCACTTACAGGTTCTATTAAAGATTTAATAAATGGGGGTAATGAAGTTCAATATGGGTATGCC
TTAATATATGCCTTAATATCAACTTTAGGGTGTGGAATTGCATATTTTTTCTTAAAGAAAAAAGGAAAAGCTATTAACTC
AAGTTTAATAAATATAGAAAGTAGTCAATGGTTAATGGACGCTTTATTAAGCATGGGAGTTTTAGTAGGATTTTTAATAG
CAAATATAATTAAGCATACAGAGTTTATTTGGTTTAATAGATACTTAGATCCATTAATGGTTATTATTTGTTCATCAGTA
TTTATAAAAATGCCTATAAAGTCCTTCGGTGATGGATTAAAAGAACTTTTAGAGTTTAAGGCTGATGATAGTATAACTTT
AGAAATAGATAAACTTGTAGAGGGAATAGAGAGAGAATATAACTTTGAAGATACCATTACAAGGGTTTCTAAAACGGGAA
ATGATTTAAGAATAGAAATAGATTTTATATATAATGAAGAATCTAATATTAAAGCATTAGATGAAATGGATAGTTTAAGA
GAAAAAATATTTAATTCTTTATCACATATAAATTATGAAAAATGGCTAAATGTATCCTTTACTAAGGATAAAAAGTGGGC
TATATAA

Upstream 100 bases:

>100_bases
ATTTATGGAGACGGAAAGTTATTTGCTTAAGATATCTACATTAGGAACATTGTTTTTTGCTGTGTTAGGAATAGCATGGG
GATGAACTGTAAAATCAGAG

Downstream 100 bases:

>100_bases
AAGCTTAAAATAAAACTTATAAATAGTTTAATAAACAACTTATAAGCTTTAATTTATAGGCTATTTATATAGCCTAGTTT
ATTTAGAAAAAGTTAGCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux System Component; Cation Efflux Family Protein; Cation Transporter Permease Component; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; Cation Efflux Pump; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Efflux Transporter Protein; CDF Family Transporter

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MILFDGMYSLGGVILSLLALMGSIYINKKDYEKYPFGKKMIEPLIVIIKSLAIFIMCIYSLTGSIKDLINGGNEVQYGYA
LIYALISTLGCGIAYFFLKKKGKAINSSLINIESSQWLMDALLSMGVLVGFLIANIIKHTEFIWFNRYLDPLMVIICSSV
FIKMPIKSFGDGLKELLEFKADDSITLEIDKLVEGIEREYNFEDTITRVSKTGNDLRIEIDFIYNEESNIKALDEMDSLR
EKIFNSLSHINYEKWLNVSFTKDKKWAI

Sequences:

>Translated_268_residues
MILFDGMYSLGGVILSLLALMGSIYINKKDYEKYPFGKKMIEPLIVIIKSLAIFIMCIYSLTGSIKDLINGGNEVQYGYA
LIYALISTLGCGIAYFFLKKKGKAINSSLINIESSQWLMDALLSMGVLVGFLIANIIKHTEFIWFNRYLDPLMVIICSSV
FIKMPIKSFGDGLKELLEFKADDSITLEIDKLVEGIEREYNFEDTITRVSKTGNDLRIEIDFIYNEESNIKALDEMDSLR
EKIFNSLSHINYEKWLNVSFTKDKKWAI
>Mature_268_residues
MILFDGMYSLGGVILSLLALMGSIYINKKDYEKYPFGKKMIEPLIVIIKSLAIFIMCIYSLTGSIKDLINGGNEVQYGYA
LIYALISTLGCGIAYFFLKKKGKAINSSLINIESSQWLMDALLSMGVLVGFLIANIIKHTEFIWFNRYLDPLMVIICSSV
FIKMPIKSFGDGLKELLEFKADDSITLEIDKLVEGIEREYNFEDTITRVSKTGNDLRIEIDFIYNEESNIKALDEMDSLR
EKIFNSLSHINYEKWLNVSFTKDKKWAI

Specific function: Unknown

COG id: COG3965

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30583; Mature: 30583

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILFDGMYSLGGVILSLLALMGSIYINKKDYEKYPFGKKMIEPLIVIIKSLAIFIMCIYS
CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTGSIKDLINGGNEVQYGYALIYALISTLGCGIAYFFLKKKGKAINSSLINIESSQWLMD
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCHHHHHHH
ALLSMGVLVGFLIANIIKHTEFIWFNRYLDPLMVIICSSVFIKMPIKSFGDGLKELLEFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ADDSITLEIDKLVEGIEREYNFEDTITRVSKTGNDLRIEIDFIYNEESNIKALDEMDSLR
CCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHH
EKIFNSLSHINYEKWLNVSFTKDKKWAI
HHHHHHHHHCCHHHHEECEECCCCCCCC
>Mature Secondary Structure
MILFDGMYSLGGVILSLLALMGSIYINKKDYEKYPFGKKMIEPLIVIIKSLAIFIMCIYS
CEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LTGSIKDLINGGNEVQYGYALIYALISTLGCGIAYFFLKKKGKAINSSLINIESSQWLMD
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCHHHHHHH
ALLSMGVLVGFLIANIIKHTEFIWFNRYLDPLMVIICSSVFIKMPIKSFGDGLKELLEFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
ADDSITLEIDKLVEGIEREYNFEDTITRVSKTGNDLRIEIDFIYNEESNIKALDEMDSLR
CCCCEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHH
EKIFNSLSHINYEKWLNVSFTKDKKWAI
HHHHHHHHHCCHHHHEECEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA