Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yybI [H]

Identifier: 18310604

GI number: 18310604

Start: 1891744

End: 1892739

Strand: Reverse

Name: yybI [H]

Synonym: CPE1622

Alternate gene names: 18310604

Gene position: 1892739-1891744 (Counterclockwise)

Preceding gene: 18310607

Following gene: 18310603

Centisome position: 62.44

GC content: 25.3

Gene sequence:

>996_bases
ATGCTTGAGAATAATAATGAAAAAATAATAGATTATAAATTAGGAGACGTTACTGGTGATGGTATTAATGACGAAGTTTA
TATTATGTCCTGTGCCTTTAATAAATGTTTAAATAGACATTGGTTACTTATTAAAGAGGGGAATTCAGGAAGGGTTGTAA
GGTATGAATTAGAAGAAAATAATTATAATTTTGAAGTTCATTTAGAACCCTTTAGGGATCCAAATAAATTAGATATATTT
ATAAGATCCATAGGTGATTGTTTTGGGGGATGTGTTAAGGGGCAAATTTTTACTTATGAGGGAGAGGAATTAAAGGAAAT
ATTTAATACCAATGATTTCTATGAGAAAAATAAAGTAAGTGCTTTTTATAGAGATGATTATAAAGTTGAGGTACTTAACT
ATGAAAGAAATAAAAAATATATTGTTGATATAAAAGAAAATTTTAAATATTATCTAGACTTTGTATATTCTGGAGATGGA
AAAGTAAAAGAAGGAAAGGAGAAAGCAAATATAAGTAGTGTATGGGGATGTAATTCATATTATCCTATGGGAAGTGAAAT
TGCTAATTTAAGTATTGTTCAAAAGGTTATTGGTCAAGCAGCTACGGATAATATAGGTCTAATTGAAAGTACATTAAAAT
GGCAAGGTAATTCTTTTATTATAATTGATCAAACAGTAATTTTGAAAGGAAATCTCATAAATCAAAATAACAGAAGTAAA
GAAATAAGTAATAAAAAAGATTTTTTAATTGGTACAAGAAATCTTTATGAAAATAACTGGAAAAGTTTAGCTGAATACTT
TGATGATAATGTAAATTTTGATTCATTATCAATATATTGGTACTATTTAGCTGTGTTACAATTCTTTGCGAAAGATTTAA
TTGAAGCTTTAAAATCAATAAATATGAATTTAAGTTTTCAATATCCCTATCCTTCAAAGGAAAAAGCTCTAATATTAAAA
GAAAATATTGAATATAGTATTAGATTAAATAAATAA

Upstream 100 bases:

>100_bases
TAAACTAAATTAATTTAAATTTCACTTGTTTTCAAATGAAAGTAACAGATAAGGAGATAGAAGATAAAATAATATTATAA
CTATATAATTTGGAGTTAAT

Downstream 100 bases:

>100_bases
TTAGTTTTTAAAGTAGCTTTCTTATATAAAATAGTGCTTAAAATGTTTTATACTAAATTTTATACAAGGTAAAGATAATA
TAATAGTGTCATATTTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLENNNEKIIDYKLGDVTGDGINDEVYIMSCAFNKCLNRHWLLIKEGNSGRVVRYELEENNYNFEVHLEPFRDPNKLDIF
IRSIGDCFGGCVKGQIFTYEGEELKEIFNTNDFYEKNKVSAFYRDDYKVEVLNYERNKKYIVDIKENFKYYLDFVYSGDG
KVKEGKEKANISSVWGCNSYYPMGSEIANLSIVQKVIGQAATDNIGLIESTLKWQGNSFIIIDQTVILKGNLINQNNRSK
EISNKKDFLIGTRNLYENNWKSLAEYFDDNVNFDSLSIYWYYLAVLQFFAKDLIEALKSINMNLSFQYPYPSKEKALILK
ENIEYSIRLNK

Sequences:

>Translated_331_residues
MLENNNEKIIDYKLGDVTGDGINDEVYIMSCAFNKCLNRHWLLIKEGNSGRVVRYELEENNYNFEVHLEPFRDPNKLDIF
IRSIGDCFGGCVKGQIFTYEGEELKEIFNTNDFYEKNKVSAFYRDDYKVEVLNYERNKKYIVDIKENFKYYLDFVYSGDG
KVKEGKEKANISSVWGCNSYYPMGSEIANLSIVQKVIGQAATDNIGLIESTLKWQGNSFIIIDQTVILKGNLINQNNRSK
EISNKKDFLIGTRNLYENNWKSLAEYFDDNVNFDSLSIYWYYLAVLQFFAKDLIEALKSINMNLSFQYPYPSKEKALILK
ENIEYSIRLNK
>Mature_331_residues
MLENNNEKIIDYKLGDVTGDGINDEVYIMSCAFNKCLNRHWLLIKEGNSGRVVRYELEENNYNFEVHLEPFRDPNKLDIF
IRSIGDCFGGCVKGQIFTYEGEELKEIFNTNDFYEKNKVSAFYRDDYKVEVLNYERNKKYIVDIKENFKYYLDFVYSGDG
KVKEGKEKANISSVWGCNSYYPMGSEIANLSIVQKVIGQAATDNIGLIESTLKWQGNSFIIIDQTVILKGNLINQNNRSK
EISNKKDFLIGTRNLYENNWKSLAEYFDDNVNFDSLSIYWYYLAVLQFFAKDLIEALKSINMNLSFQYPYPSKEKALILK
ENIEYSIRLNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38657; Mature: 38657

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENNNEKIIDYKLGDVTGDGINDEVYIMSCAFNKCLNRHWLLIKEGNSGRVVRYELEEN
CCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEECCCCCEEEEEEECC
NYNFEVHLEPFRDPNKLDIFIRSIGDCFGGCVKGQIFTYEGEELKEIFNTNDFYEKNKVS
CEEEEEEEECCCCCCCEEHHHHHHHHHHCCHHCCEEEEECCHHHHHHHCCCCCCCCCCCE
AFYRDDYKVEVLNYERNKKYIVDIKENFKYYLDFVYSGDGKVKEGKEKANISSVWGCNSY
EEEECCEEEEEEEECCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCC
YPMGSEIANLSIVQKVIGQAATDNIGLIESTLKWQGNSFIIIDQTVILKGNLINQNNRSK
CCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHEECCCEEEEEEEEEEEECCEECCCCCCC
EISNKKDFLIGTRNLYENNWKSLAEYFDDNVNFDSLSIYWYYLAVLQFFAKDLIEALKSI
CCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NMNLSFQYPYPSKEKALILKENIEYSIRLNK
CCCEEEECCCCCCCCEEEEEECCEEEEEECC
>Mature Secondary Structure
MLENNNEKIIDYKLGDVTGDGINDEVYIMSCAFNKCLNRHWLLIKEGNSGRVVRYELEEN
CCCCCCCEEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCEEEEEEECCCCCEEEEEEECC
NYNFEVHLEPFRDPNKLDIFIRSIGDCFGGCVKGQIFTYEGEELKEIFNTNDFYEKNKVS
CEEEEEEEECCCCCCCEEHHHHHHHHHHCCHHCCEEEEECCHHHHHHHCCCCCCCCCCCE
AFYRDDYKVEVLNYERNKKYIVDIKENFKYYLDFVYSGDGKVKEGKEKANISSVWGCNSY
EEEECCEEEEEEEECCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCEECCCCCC
YPMGSEIANLSIVQKVIGQAATDNIGLIESTLKWQGNSFIIIDQTVILKGNLINQNNRSK
CCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHEECCCEEEEEEEEEEEECCEECCCCCCC
EISNKKDFLIGTRNLYENNWKSLAEYFDDNVNFDSLSIYWYYLAVLQFFAKDLIEALKSI
CCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NMNLSFQYPYPSKEKALILKENIEYSIRLNK
CCCEEEECCCCCCCCEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]