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The map label for this gene is 18310543

Identifier: 18310543

GI number: 18310543

Start: 1831325

End: 1831969

Strand: Reverse

Name: 18310543

Synonym: CPE1561

Alternate gene names: NA

Gene position: 1831969-1831325 (Counterclockwise)

Preceding gene: 18310544

Following gene: 18310542

Centisome position: 60.43

GC content: 24.03

Gene sequence:

>645_bases
ATGATTGAGAATATATCGAAGTTAATAGCTGAAAAAGTTTCTAGTGAATTAAATTATGATAATGAAAGAAAAGAAATTAT
TCAGTATGGAACTTATGCTCTAATACAAACATTAATATCAATAATTTCAGTACTTATACTGGGATTAGTGTTTAATATAG
CTTTAGAAGCTTTGATATTTTTATTTACAGCAAGCATACTTAGAAAATATTCTGGAGGAGCACATTCAGAATCCTCTAAT
GTATGTACTTTATTAGGCATAATAATTTCAATATGTATTGGTTTTTTAATAAAAAGTAGTTTTTTTGCAAAAATGAACTT
TGAGCTTGTAGTGTTTATTGGAATAGTTATTTTTGTTTTTGGATATTTTATAGTTTTTAAATTTGCTCCAGTAGATACTA
AAAATAAACCAATAAAAACCGAAAAGAAGAAAAAACGCATGAAAAAAGGATCTTTAAAGATTTTAACTATATATTTATTT
ATTGAAGTATTAAGTATAATTTTATATTATAATTCAGGATGGAGTTTAGCTAAGCCTGTTATGTTAAGTATAATCTTTGG
AGTAGCATGGCAATGTATGACTCTAACCTACATAGGAAATATATTGTTAAAAACTATAGATTCTTTTACAAATAAATTAT
TATAA

Upstream 100 bases:

>100_bases
TTTACAAAAACAATATTAGGTATTCCATCTACTATAATGTTTATGGTTATTGTTACTTATTATTATTTAATAGCATCAAA
AAAAGGAAAGTTGAGATAAA

Downstream 100 bases:

>100_bases
ATCTTGAGGGGATGAGTTAAATGAAAAAATTAAACAAAAACTTATTAACATTATTTGCTGCATTAACAACAGTAGTTGCA
ACAACAGTTGCTACTTCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIENISKLIAEKVSSELNYDNERKEIIQYGTYALIQTLISIISVLILGLVFNIALEALIFLFTASILRKYSGGAHSESSN
VCTLLGIIISICIGFLIKSSFFAKMNFELVVFIGIVIFVFGYFIVFKFAPVDTKNKPIKTEKKKKRMKKGSLKILTIYLF
IEVLSIILYYNSGWSLAKPVMLSIIFGVAWQCMTLTYIGNILLKTIDSFTNKLL

Sequences:

>Translated_214_residues
MIENISKLIAEKVSSELNYDNERKEIIQYGTYALIQTLISIISVLILGLVFNIALEALIFLFTASILRKYSGGAHSESSN
VCTLLGIIISICIGFLIKSSFFAKMNFELVVFIGIVIFVFGYFIVFKFAPVDTKNKPIKTEKKKKRMKKGSLKILTIYLF
IEVLSIILYYNSGWSLAKPVMLSIIFGVAWQCMTLTYIGNILLKTIDSFTNKLL
>Mature_214_residues
MIENISKLIAEKVSSELNYDNERKEIIQYGTYALIQTLISIISVLILGLVFNIALEALIFLFTASILRKYSGGAHSESSN
VCTLLGIIISICIGFLIKSSFFAKMNFELVVFIGIVIFVFGYFIVFKFAPVDTKNKPIKTEKKKKRMKKGSLKILTIYLF
IEVLSIILYYNSGWSLAKPVMLSIIFGVAWQCMTLTYIGNILLKTIDSFTNKLL

Specific function: May be involved in the proteolytic processing of a quorum sensing system signal molecule precursor (Potential)

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AgrB family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AGRB2_CLOPE (Q8XK42)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_562477.1
- GeneID:   989871
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE1561
- NMPDR:   fig|195102.1.peg.1624
- HOGENOM:   HBG304048
- OMA:   KKYIIYS
- ProtClustDB:   CLSK899360
- BioCyc:   CPER195102:CPE1561-MONOMER
- HAMAP:   MF_00784
- InterPro:   IPR006741
- SMART:   SM00793

Pfam domain/function: PF04647 AgrB

EC number: NA

Molecular weight: Translated: 24155; Mature: 24155

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xea51ffc)-; HASH(0xec2cad8)-; HASH(0xdecb480)-; HASH(0xf519d4c)-; HASH(0xec88240)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENISKLIAEKVSSELNYDNERKEIIQYGTYALIQTLISIISVLILGLVFNIALEALIF
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTASILRKYSGGAHSESSNVCTLLGIIISICIGFLIKSSFFAKMNFELVVFIGIVIFVF
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GYFIVFKFAPVDTKNKPIKTEKKKKRMKKGSLKILTIYLFIEVLSIILYYNSGWSLAKPV
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
MLSIIFGVAWQCMTLTYIGNILLKTIDSFTNKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MIENISKLIAEKVSSELNYDNERKEIIQYGTYALIQTLISIISVLILGLVFNIALEALIF
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFTASILRKYSGGAHSESSNVCTLLGIIISICIGFLIKSSFFAKMNFELVVFIGIVIFVF
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
GYFIVFKFAPVDTKNKPIKTEKKKKRMKKGSLKILTIYLFIEVLSIILYYNSGWSLAKPV
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
MLSIIFGVAWQCMTLTYIGNILLKTIDSFTNKLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11792842