Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310544

Identifier: 18310544

GI number: 18310544

Start: 1831971

End: 1832480

Strand: Reverse

Name: 18310544

Synonym: CPE1562

Alternate gene names: NA

Gene position: 1832480-1831971 (Counterclockwise)

Preceding gene: 18310545

Following gene: 18310543

Centisome position: 60.45

GC content: 21.96

Gene sequence:

>510_bases
ATGAATATAAGCAAAGGAATATATTTGCTTAGTGACAGCGGAGGAAGAATGTTAAAAGTAACTTTATTTGAAACTTTAGT
AAGGGGAATACCAGAAGCTCTTACGATGATGTTAGCCATGTATGCTTTCGCTAATAAAAAGTTAGAAAAGAAGGAATATT
TAATTTCAAGTTTGATATTGGTATTAGTAGTTTATTTAATTAGATTATTACCTATAAATTATGGTATTCATACAATATTG
AACATATTTGTTTTAATATTTTTAGCATTCAATGTTAATAAAATAGATTTAATAGTAAGTATAAAAGCATCAATATTAAT
ATTAATGATTTTATTTTTATGTGAAGGTTTAAACTTATTATTTATAGAGAAATTTTTCAATGAAAATATTGATTATTTAT
TTGAAAATGTATTTACAAAAACAATATTAGGTATTCCATCTACTATAATGTTTATGGTTATTGTTACTTATTATTATTTA
ATAGCATCAAAAAAAGGAAAGTTGAGATAA

Upstream 100 bases:

>100_bases
ATAGATGTAGGATATAGTGTTTTAAGTATTGGTGATATACTTATAAGAGTTTTTGTAGTCATAATAATATATGTTACAGT
TAAAAAAACTAATGAGAAAA

Downstream 100 bases:

>100_bases
AATGATTGAGAATATATCGAAGTTAATAGCTGAAAAAGTTTCTAGTGAATTAAATTATGATAATGAAAGAAAAGAAATTA
TTCAGTATGGAACTTATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLILVLVVYLIRLLPINYGIHTIL
NIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLLFIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYL
IASKKGKLR

Sequences:

>Translated_169_residues
MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLILVLVVYLIRLLPINYGIHTIL
NIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLLFIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYL
IASKKGKLR
>Mature_169_residues
MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLILVLVVYLIRLLPINYGIHTIL
NIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLLFIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYL
IASKKGKLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19392; Mature: 19392

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLIL
CCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VLVVYLIRLLPINYGIHTILNIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
FIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYLIASKKGKLR
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNISKGIYLLSDSGGRMLKVTLFETLVRGIPEALTMMLAMYAFANKKLEKKEYLISSLIL
CCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VLVVYLIRLLPINYGIHTILNIFVLIFLAFNVNKIDLIVSIKASILILMILFLCEGLNLL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
FIEKFFNENIDYLFENVFTKTILGIPSTIMFMVIVTYYYLIASKKGKLR
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA