| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is 18310477
Identifier: 18310477
GI number: 18310477
Start: 1747807
End: 1748061
Strand: Reverse
Name: 18310477
Synonym: CPE1495
Alternate gene names: NA
Gene position: 1748061-1747807 (Counterclockwise)
Preceding gene: 18310480
Following gene: 18310476
Centisome position: 57.66
GC content: 30.59
Gene sequence:
>255_bases ATGAGTGGTGTAGCAGGAGAAGGATGCGAGATTTTAGTACCATTTAATGAGAGAAGACCTTTAGCTGAGATAGAGAGAAG TTTAGTTAAAACATATAGAAAACAAGTTTGGTCAAAATTTATAAAAGCTATAAAGGATTATAAATTAGTAGAAGAAGGGG ATAAGATTAGCTATTGCTATTTCAGGAGGAAAAGATTCTTTAATAATGGCAAAGCTTTTTCAAGAGTTAAAAAAACATGG TCAAATAAACTTTGA
Upstream 100 bases:
>100_bases TTAAATAGGAAGGGGATTTAATTAAGTACCATTTTATAAAGACAAAAAGAGATAAAATTGTTATAATAACAAAAGAGTTT TATATAGTGAGGTGATTAGA
Downstream 100 bases:
>100_bases ACTTGTATTTTTAGCTATGGATCCAGGATATCATCCTCAAATTAGAGAGTTACTTGAGGATAATTGTAAATACTTAGATA TACCAGTACATATTTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: PP-Loop Family Protein; Pp-Loop Family Protein; ATPase
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSGVAGEGCEILVPFNERRPLAEIERSLVKTYRKQVWSKFIKAIKDYKLVEEGDKISYCYFRRKRFFNNGKAFSRVKKTW SNKL
Sequences:
>Translated_84_residues MSGVAGEGCEILVPFNERRPLAEIERSLVKTYRKQVWSKFIKAIKDYKLVEEGDKISYCYFRRKRFFNNGKAFSRVKKTW SNKL >Mature_83_residues SGVAGEGCEILVPFNERRPLAEIERSLVKTYRKQVWSKFIKAIKDYKLVEEGDKISYCYFRRKRFFNNGKAFSRVKKTWS NKL
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9985; Mature: 9854
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVAGEGCEILVPFNERRPLAEIERSLVKTYRKQVWSKFIKAIKDYKLVEEGDKISYCY CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FRRKRFFNNGKAFSRVKKTWSNKL HHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure SGVAGEGCEILVPFNERRPLAEIERSLVKTYRKQVWSKFIKAIKDYKLVEEGDKISYCY CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH FRRKRFFNNGKAFSRVKKTWSNKL HHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA