| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310480
Identifier: 18310480
GI number: 18310480
Start: 1750111
End: 1750614
Strand: Reverse
Name: 18310480
Synonym: CPE1498
Alternate gene names: NA
Gene position: 1750614-1750111 (Counterclockwise)
Preceding gene: 18310481
Following gene: 18310477
Centisome position: 57.75
GC content: 27.38
Gene sequence:
>504_bases ATGACAGATAAAAATATAAAAAGAATAGTTATATCAGCACTTATTGCAGCTTTATATGCAACCTTAACAATAGCTTTAGC ACCTATAAGTTATTTAGGGGTACAATTTAGAATATCAGAAATTATGGTTCTTTTAGCCTTTTATAAAAAAGATTATATAG TAGGATTGACCCTAGGATGTTTCATAGCAAATATATTAGGGCCAAATGGTACTATTGATATTGTTTTAGGAACCTTTGCA ACCTTTATAAGTGTTTGGGGAATTTATTTAACTGGTAAATATATAAAAGGAAAGAAAGCTATATGGATTGCTTCAATTTG GCCAACAATATTTAATGGTATTATAATAGGTTGGATGCTTAATTATGTTTATGGACTACCTTTAGTGTTATCAATGGGAC AGGTTGCCTTAGGTGAGTTTGTTATAATAACAGTAATAGGAGTTCCTGTATTTAATTTTATAAATAAAAAATATTTTGGT AAATTAAATATTATAACAAGATAA
Upstream 100 bases:
>100_bases TTGTTTTAAATTTAAAATAATATATTTAGGGTTTTATTTACCTTTCTTAAAACATCTTAGTTAGGAGTCTTTTAGAATTT GTATGTTTTAAGGAGGAAAT
Downstream 100 bases:
>100_bases TTTTATTAATATAGAAATAAACTATTTTATAAAAAACTAATAATAAACCTTACAAATTATCTCAAGGAATAACTAGATAA GTTTTAGGATTTAAATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Citrulline Cluster-Linked Protein; Integral Membrane Protein; Citrulline Related Protein
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTDKNIKRIVISALIAALYATLTIALAPISYLGVQFRISEIMVLLAFYKKDYIVGLTLGCFIANILGPNGTIDIVLGTFA TFISVWGIYLTGKYIKGKKAIWIASIWPTIFNGIIIGWMLNYVYGLPLVLSMGQVALGEFVIITVIGVPVFNFINKKYFG KLNIITR
Sequences:
>Translated_167_residues MTDKNIKRIVISALIAALYATLTIALAPISYLGVQFRISEIMVLLAFYKKDYIVGLTLGCFIANILGPNGTIDIVLGTFA TFISVWGIYLTGKYIKGKKAIWIASIWPTIFNGIIIGWMLNYVYGLPLVLSMGQVALGEFVIITVIGVPVFNFINKKYFG KLNIITR >Mature_166_residues TDKNIKRIVISALIAALYATLTIALAPISYLGVQFRISEIMVLLAFYKKDYIVGLTLGCFIANILGPNGTIDIVLGTFAT FISVWGIYLTGKYIKGKKAIWIASIWPTIFNGIIIGWMLNYVYGLPLVLSMGQVALGEFVIITVIGVPVFNFINKKYFGK LNIITR
Specific function: Unknown
COG id: COG4708
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18476; Mature: 18344
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKNIKRIVISALIAALYATLTIALAPISYLGVQFRISEIMVLLAFYKKDYIVGLTLGC CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FIANILGPNGTIDIVLGTFATFISVWGIYLTGKYIKGKKAIWIASIWPTIFNGIIIGWML HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHH NYVYGLPLVLSMGQVALGEFVIITVIGVPVFNFINKKYFGKLNIITR HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC >Mature Secondary Structure TDKNIKRIVISALIAALYATLTIALAPISYLGVQFRISEIMVLLAFYKKDYIVGLTLGC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FIANILGPNGTIDIVLGTFATFISVWGIYLTGKYIKGKKAIWIASIWPTIFNGIIIGWML HHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHH NYVYGLPLVLSMGQVALGEFVIITVIGVPVFNFINKKYFGKLNIITR HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA