| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is clsD [H]
Identifier: 18310412
GI number: 18310412
Start: 1685736
End: 1687166
Strand: Direct
Name: clsD [H]
Synonym: CPE1430
Alternate gene names: 18310412
Gene position: 1685736-1687166 (Clockwise)
Preceding gene: 18310411
Following gene: 18310427
Centisome position: 55.61
GC content: 27.18
Gene sequence:
>1431_bases ATGCATTTATTTATAAATATGATATTTTTAATAAATATTGTATTTATCATTTCCATAATCTTCATTGAAAGAAGAAATCC CCAAACTACTTGGGCTTGGATTTTAATATTAACCTTTCTACCCATATTAGGATTTATAATCTACATTTTATTTGGTCAAA ATATTACCCGTGAAAAAAACTTTAAAAGAAAAATTCTAGATGACAAGACAAAACAAAAATATTTAAATTCATTTAAGTCT CACTACAAATTAGATAATATTTCTTTAAAATATAAAGACTTAATAATGATGAACTTTAATAATGACAATTCAACCTACAC TCAACGTAATGATATAGATTTATATTTTGATGCTAATAGTCTTTTTGAAGAAATGATTGATGAAATAAATAAAGCCGAAA AATTTATTCATATGGAATTTTATATTTTTAAAAGCGATGAAATAGGCAAAAAAATCTTACAAGCCTTAACTAAGAAAGCT AAAGAAGGTGTTGAAGTAAAATTACTAGTAGATTCTATTGGTAACTCTATACACAAAAAAGATATAGATAAATTAAAGGC AGCTGGTGGAGATTTTAAAATATTTTTTCCTGGCTTTTGCAAATATATAAACTTAAGAATTAACTATAGAAATCATAGAA AGATACTTATTATAGATAGCAAAGTTGCTTTTTTAGGTGGATTTAATATAGGTGATGAATATCTTGGAAAAGATAAAAAT ATTGGTCATTGGCGTGATACTCATACTAAAATAAAGGGACTTGCTATTAATGATCTAGAAGGAAGATTCCTTTTAGATTG GAGTTATGCTAATGAATCAGATTTAGACATAGATTTAAAAAAATATTTTATAAATCCTCATTCAACTGATTTGCCAAAGA AGATTATTGGAGCTCAAATAGTTTCCTCTGGTCCTGACCATACTGAACAACAAATAAAAAATGGATATTTTAAAATTATA AATTCAGCTAAGAAAAATCTTTTTATACAAACGCCTTATTTTGTCCCTGATGAACCTATGCTTGAAGCTTTAAGACTTGC TGCCTTATCTGGAGTTGATGTAAAAATAATGCTACCTGGTAATCCTGATCATAAATTTATGGGATGGATAGCAAACTCTT ATTTTGAATCCTTATTAAATGCTGGTGCAAAGATCTACTTATATGAAAAGGGCTTTCTTCACGCTAAAACCATAGTGGCA GACTCTTCTATATGTAGTGTAGGAACAGCTAACATGGATATAAGAAGCTTTTCTTTAAACTTTGAAAGCAATATATTTAT ATATAATGAAGCTATTTCAAAATCTATGGAAGAACAATTCTTTAAAGACCTAAAGGTGTGTACTAAAGTAACCCTTGAAA GTTTTGAAAAACGATCTATTATATCAAGAATTGGAGAATCCATAACAAGATTAGTATCTCCTTTAATGTAG
Upstream 100 bases:
>100_bases AACAAATATATATAAGGTAACATTTTTAGTTTATCAGTCTAATATATATTAAAAAAAATTTAGACTGATAAACCTTTCTA AATACAAAGGAGGAATTATT
Downstream 100 bases:
>100_bases AAAAATACAGTGTATGATAATACACTGTATTTTTTATTAATAATAAATTACAAAACTTTAAATTATATTAATTAACCACT ATTTTAAAATAATATTGATT
Product: cardiolipin synthase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MHLFINMIFLINIVFIISIIFIERRNPQTTWAWILILTFLPILGFIIYILFGQNITREKNFKRKILDDKTKQKYLNSFKS HYKLDNISLKYKDLIMMNFNNDNSTYTQRNDIDLYFDANSLFEEMIDEINKAEKFIHMEFYIFKSDEIGKKILQALTKKA KEGVEVKLLVDSIGNSIHKKDIDKLKAAGGDFKIFFPGFCKYINLRINYRNHRKILIIDSKVAFLGGFNIGDEYLGKDKN IGHWRDTHTKIKGLAINDLEGRFLLDWSYANESDLDIDLKKYFINPHSTDLPKKIIGAQIVSSGPDHTEQQIKNGYFKII NSAKKNLFIQTPYFVPDEPMLEALRLAALSGVDVKIMLPGNPDHKFMGWIANSYFESLLNAGAKIYLYEKGFLHAKTIVA DSSICSVGTANMDIRSFSLNFESNIFIYNEAISKSMEEQFFKDLKVCTKVTLESFEKRSIISRIGESITRLVSPLM
Sequences:
>Translated_476_residues MHLFINMIFLINIVFIISIIFIERRNPQTTWAWILILTFLPILGFIIYILFGQNITREKNFKRKILDDKTKQKYLNSFKS HYKLDNISLKYKDLIMMNFNNDNSTYTQRNDIDLYFDANSLFEEMIDEINKAEKFIHMEFYIFKSDEIGKKILQALTKKA KEGVEVKLLVDSIGNSIHKKDIDKLKAAGGDFKIFFPGFCKYINLRINYRNHRKILIIDSKVAFLGGFNIGDEYLGKDKN IGHWRDTHTKIKGLAINDLEGRFLLDWSYANESDLDIDLKKYFINPHSTDLPKKIIGAQIVSSGPDHTEQQIKNGYFKII NSAKKNLFIQTPYFVPDEPMLEALRLAALSGVDVKIMLPGNPDHKFMGWIANSYFESLLNAGAKIYLYEKGFLHAKTIVA DSSICSVGTANMDIRSFSLNFESNIFIYNEAISKSMEEQFFKDLKVCTKVTLESFEKRSIISRIGESITRLVSPLM >Mature_476_residues MHLFINMIFLINIVFIISIIFIERRNPQTTWAWILILTFLPILGFIIYILFGQNITREKNFKRKILDDKTKQKYLNSFKS HYKLDNISLKYKDLIMMNFNNDNSTYTQRNDIDLYFDANSLFEEMIDEINKAEKFIHMEFYIFKSDEIGKKILQALTKKA KEGVEVKLLVDSIGNSIHKKDIDKLKAAGGDFKIFFPGFCKYINLRINYRNHRKILIIDSKVAFLGGFNIGDEYLGKDKN IGHWRDTHTKIKGLAINDLEGRFLLDWSYANESDLDIDLKKYFINPHSTDLPKKIIGAQIVSSGPDHTEQQIKNGYFKII NSAKKNLFIQTPYFVPDEPMLEALRLAALSGVDVKIMLPGNPDHKFMGWIANSYFESLLNAGAKIYLYEKGFLHAKTIVA DSSICSVGTANMDIRSFSLNFESNIFIYNEAISKSMEEQFFKDLKVCTKVTLESFEKRSIISRIGESITRLVSPLM
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=470, Percent_Identity=27.2340425531915, Blast_Score=194, Evalue=9e-51, Organism=Escherichia coli, GI1787007, Length=365, Percent_Identity=25.7534246575342, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 55041; Mature: 55041
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLFINMIFLINIVFIISIIFIERRNPQTTWAWILILTFLPILGFIIYILFGQNITREKN CCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FKRKILDDKTKQKYLNSFKSHYKLDNISLKYKDLIMMNFNNDNSTYTQRNDIDLYFDANS HHHHHHCCHHHHHHHHHHHHHCEECCCEEEEEEEEEEEECCCCCCEEECCCEEEEECHHH LFEEMIDEINKAEKFIHMEFYIFKSDEIGKKILQALTKKAKEGVEVKLLVDSIGNSIHKK HHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCHHHHH DIDKLKAAGGDFKIFFPGFCKYINLRINYRNHRKILIIDSKVAFLGGFNIGDEYLGKDKN HHHHHHHCCCCEEEECCCCEEEEEEEEEEECCEEEEEEECCEEEEECCCCCHHHCCCCCC IGHWRDTHTKIKGLAINDLEGRFLLDWSYANESDLDIDLKKYFINPHSTDLPKKIIGAQI CCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCEEEHHEEECCCCCCCHHHHHHHHH VSSGPDHTEQQIKNGYFKIINSAKKNLFIQTPYFVPDEPMLEALRLAALSGVDVKIMLPG HCCCCCHHHHHHHCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECC NPDHKFMGWIANSYFESLLNAGAKIYLYEKGFLHAKTIVADSSICSVGTANMDIRSFSLN CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCHHCCCCCCCEEEEEEEC FESNIFIYNEAISKSMEEQFFKDLKVCTKVTLESFEKRSIISRIGESITRLVSPLM CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHLFINMIFLINIVFIISIIFIERRNPQTTWAWILILTFLPILGFIIYILFGQNITREKN CCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FKRKILDDKTKQKYLNSFKSHYKLDNISLKYKDLIMMNFNNDNSTYTQRNDIDLYFDANS HHHHHHCCHHHHHHHHHHHHHCEECCCEEEEEEEEEEEECCCCCCEEECCCEEEEECHHH LFEEMIDEINKAEKFIHMEFYIFKSDEIGKKILQALTKKAKEGVEVKLLVDSIGNSIHKK HHHHHHHHHHHHHHEEEEEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCHHHHH DIDKLKAAGGDFKIFFPGFCKYINLRINYRNHRKILIIDSKVAFLGGFNIGDEYLGKDKN HHHHHHHCCCCEEEECCCCEEEEEEEEEEECCEEEEEEECCEEEEECCCCCHHHCCCCCC IGHWRDTHTKIKGLAINDLEGRFLLDWSYANESDLDIDLKKYFINPHSTDLPKKIIGAQI CCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCEEEHHEEECCCCCCCHHHHHHHHH VSSGPDHTEQQIKNGYFKIINSAKKNLFIQTPYFVPDEPMLEALRLAALSGVDVKIMLPG HCCCCCHHHHHHHCHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECC NPDHKFMGWIANSYFESLLNAGAKIYLYEKGFLHAKTIVADSSICSVGTANMDIRSFSLN CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCHHCCCCCCCEEEEEEEC FESNIFIYNEAISKSMEEQFFKDLKVCTKVTLESFEKRSIISRIGESITRLVSPLM CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10585141 [H]