| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is plsC [H]
Identifier: 18310400
GI number: 18310400
Start: 1672370
End: 1673098
Strand: Direct
Name: plsC [H]
Synonym: CPE1418
Alternate gene names: 18310400
Gene position: 1672370-1673098 (Clockwise)
Preceding gene: 18310392
Following gene: 18310403
Centisome position: 55.17
GC content: 29.9
Gene sequence:
>729_bases ATGTTTAGATCTATATATTGGTATGGAAAAGGATATGCCTGGACATTAATAAAATCCTTATCTGATATAAAAAAAATAAA TAAAATGGAAGAGGAAGGCAAGCTTGAGGAAAGAGATGAATACATATATCAATGCAGTAGAAGAATAGCTCATACTTTTC TTAAGGATGCTGGAATAGAAGTTAATGTTGAAGGTTTAGAGAATATTCCTGATGGACCTGTTCTTTTTGTTTGTAACCAT CAAAGTAATATGGATATTCCTGTAATCATGTACTCTATTGATAGACCAAAGGGATTCATAGCAAAAAAAGAACTTGAAAA AATGCCTATATTAAAAGATTGGATAATACTTTCAAAGGCTATATTTATTGACAGGGAACATCCTAAAAAAGCTATGGCAG GTATTATACAAGGAATTAAACAATTAAAAGAAGGATATTCAATGGTTGTTTTTCCTGAAGGAACAAGAAGTCAATGTAGT AAAATGGGAGAATTTAAAGCTGGTAGTTTTAAATTAGCTACTAAACCAAAGGTTCCTATAGTTCCTCTTACAATTGATGG AACATATAAAATAATGGAAGGAAATCATTATTTCATAAAACCTGGTAAAGTAAATCTTTATATTCATCCACCAGTTTACA CTGATAAACTTACAAAGGAAGAAATTACAGAGCTTCCTGAAAAAGTTGAAAATATAGTTAGAAGTAAACTTCCTAATGAA GGAAGATAA
Upstream 100 bases:
>100_bases TTTTTATTATTGCTCTCCACAAAATAAATTCCATATTTGATATTTTTTAAAAACTGTTATAATATTACTTAGTACTAGTA ATATTAAAGGGGCGAAATAT
Downstream 100 bases:
>100_bases AAAAATCCATGAGTAAATTTTACTCATGGATTTTTTATTTATATTAATTTAAAACAGTTCCTTCTAATTCTGCACTCTCT TCACTTAAAGCTTTTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MFRSIYWYGKGYAWTLIKSLSDIKKINKMEEEGKLEERDEYIYQCSRRIAHTFLKDAGIEVNVEGLENIPDGPVLFVCNH QSNMDIPVIMYSIDRPKGFIAKKELEKMPILKDWIILSKAIFIDREHPKKAMAGIIQGIKQLKEGYSMVVFPEGTRSQCS KMGEFKAGSFKLATKPKVPIVPLTIDGTYKIMEGNHYFIKPGKVNLYIHPPVYTDKLTKEEITELPEKVENIVRSKLPNE GR
Sequences:
>Translated_242_residues MFRSIYWYGKGYAWTLIKSLSDIKKINKMEEEGKLEERDEYIYQCSRRIAHTFLKDAGIEVNVEGLENIPDGPVLFVCNH QSNMDIPVIMYSIDRPKGFIAKKELEKMPILKDWIILSKAIFIDREHPKKAMAGIIQGIKQLKEGYSMVVFPEGTRSQCS KMGEFKAGSFKLATKPKVPIVPLTIDGTYKIMEGNHYFIKPGKVNLYIHPPVYTDKLTKEEITELPEKVENIVRSKLPNE GR >Mature_242_residues MFRSIYWYGKGYAWTLIKSLSDIKKINKMEEEGKLEERDEYIYQCSRRIAHTFLKDAGIEVNVEGLENIPDGPVLFVCNH QSNMDIPVIMYSIDRPKGFIAKKELEKMPILKDWIILSKAIFIDREHPKKAMAGIIQGIKQLKEGYSMVVFPEGTRSQCS KMGEFKAGSFKLATKPKVPIVPLTIDGTYKIMEGNHYFIKPGKVNLYIHPPVYTDKLTKEEITELPEKVENIVRSKLPNE GR
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=193, Percent_Identity=31.6062176165803, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI15100175, Length=193, Percent_Identity=31.6062176165803, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI6041665, Length=175, Percent_Identity=28, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1789395, Length=167, Percent_Identity=28.1437125748503, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17564032, Length=193, Percent_Identity=30.0518134715026, Blast_Score=87, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6320151, Length=191, Percent_Identity=34.5549738219895, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI281364648, Length=206, Percent_Identity=29.6116504854369, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24582856, Length=206, Percent_Identity=29.6116504854369, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24582854, Length=206, Percent_Identity=29.6116504854369, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24641614, Length=180, Percent_Identity=29.4444444444444, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24641612, Length=180, Percent_Identity=29.4444444444444, Blast_Score=77, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 27830; Mature: 27830
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRSIYWYGKGYAWTLIKSLSDIKKINKMEEEGKLEERDEYIYQCSRRIAHTFLKDAGIE CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE VNVEGLENIPDGPVLFVCNHQSNMDIPVIMYSIDRPKGFIAKKELEKMPILKDWIILSKA EEECCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH IFIDREHPKKAMAGIIQGIKQLKEGYSMVVFPEGTRSQCSKMGEFKAGSFKLATKPKVPI HEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCEEEECCCCCCE VPLTIDGTYKIMEGNHYFIKPGKVNLYIHPPVYTDKLTKEEITELPEKVENIVRSKLPNE EEEEECCEEEEEECCEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GR CC >Mature Secondary Structure MFRSIYWYGKGYAWTLIKSLSDIKKINKMEEEGKLEERDEYIYQCSRRIAHTFLKDAGIE CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCE VNVEGLENIPDGPVLFVCNHQSNMDIPVIMYSIDRPKGFIAKKELEKMPILKDWIILSKA EEECCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH IFIDREHPKKAMAGIIQGIKQLKEGYSMVVFPEGTRSQCSKMGEFKAGSFKLATKPKVPI HEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCCCEEEECCCCCCE VPLTIDGTYKIMEGNHYFIKPGKVNLYIHPPVYTDKLTKEEITELPEKVENIVRSKLPNE EEEEECCEEEEEECCEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC GR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]