Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310403

Identifier: 18310403

GI number: 18310403

Start: 1675816

End: 1676568

Strand: Direct

Name: 18310403

Synonym: CPE1421

Alternate gene names: NA

Gene position: 1675816-1676568 (Clockwise)

Preceding gene: 18310400

Following gene: 18310404

Centisome position: 55.28

GC content: 30.15

Gene sequence:

>753_bases
ATGAATGCAGTCTATCAAACTAGACAAAAAACAAGAAAACTAGTAGTTATTGGTATGCTATCTGGTATATCAATATTTCT
AGGATTAACAGGATTAGGATTTATAAATATTCCACCTGTTAAGGCTACTATTATGCATATTCCTGTTATAATAGGAGCTA
TTATTGAGGGTCCTATTGTAGGAGGATTAATAGGACTAGTTTTTGGATTATTTTCTATGTATCAAGCTTTTACGGCGCCA
ATGCCAACTAGCTTTATGTTCTGGAATCCTATTATAGCTTTAGTTCCTAGAATTCTTATAGGTGTGGTAAGTTACTATGT
ATATGCATCTATGATTAAAGGATCTAAAAAGAATTTAAAAGCTACATCAATTATAAGTTCTCTTATTCTTGGAGTTCTTC
TATTTGTAAGTTCTGAAGCTTTAACAGATTCTTTAACTATATCAGCTATAATCGGTGTTTTATTCTTTTTAGCAAGTATG
ATTATCATGTTTAAATTTAAACATAAAAATAAAGAAGAAGCCCTATCTATAGGTACAGCTTCCGTAATTGGAACCTTAAC
AAATACCATAGGTGTACTTGGCTTAACATATGTTTTTTATTTAGAAAGATATGCTTCTGCTCTAGGAATATCTGAACATG
CTGCAAAATTAACTTTAGCAGGAATAGGAGTTACAAATGGAATTCCTGAAGCATTTATATCAGCCTTAATATCAATTCCT
GTTATATTAGGAGTTAGAAAAATTTTAAGATAA

Upstream 100 bases:

>100_bases
TCACTGTCGGTATTCTATATTAGAAGCTGAACTATTTTATACGGTTAAAAATTTAACAACCGAATTATATCCCACTGGGA
ATAAGAACGGAGGAGAGTCA

Downstream 100 bases:

>100_bases
TTTAAGATTATAAATATATTTTAGCGTATAGCTTACTTAAAGTTATACGCTAAAACTTTATTAAGTTATTAGTAAAGGTT
TAAATTTTTTAAACTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNAVYQTRQKTRKLVVIGMLSGISIFLGLTGLGFINIPPVKATIMHIPVIIGAIIEGPIVGGLIGLVFGLFSMYQAFTAP
MPTSFMFWNPIIALVPRILIGVVSYYVYASMIKGSKKNLKATSIISSLILGVLLFVSSEALTDSLTISAIIGVLFFLASM
IIMFKFKHKNKEEALSIGTASVIGTLTNTIGVLGLTYVFYLERYASALGISEHAAKLTLAGIGVTNGIPEAFISALISIP
VILGVRKILR

Sequences:

>Translated_250_residues
MNAVYQTRQKTRKLVVIGMLSGISIFLGLTGLGFINIPPVKATIMHIPVIIGAIIEGPIVGGLIGLVFGLFSMYQAFTAP
MPTSFMFWNPIIALVPRILIGVVSYYVYASMIKGSKKNLKATSIISSLILGVLLFVSSEALTDSLTISAIIGVLFFLASM
IIMFKFKHKNKEEALSIGTASVIGTLTNTIGVLGLTYVFYLERYASALGISEHAAKLTLAGIGVTNGIPEAFISALISIP
VILGVRKILR
>Mature_250_residues
MNAVYQTRQKTRKLVVIGMLSGISIFLGLTGLGFINIPPVKATIMHIPVIIGAIIEGPIVGGLIGLVFGLFSMYQAFTAP
MPTSFMFWNPIIALVPRILIGVVSYYVYASMIKGSKKNLKATSIISSLILGVLLFVSSEALTDSLTISAIIGVLFFLASM
IIMFKFKHKNKEEALSIGTASVIGTLTNTIGVLGLTYVFYLERYASALGISEHAAKLTLAGIGVTNGIPEAFISALISIP
VILGVRKILR

Specific function: Unknown

COG id: COG4684

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26741; Mature: 26741

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVYQTRQKTRKLVVIGMLSGISIFLGLTGLGFINIPPVKATIMHIPVIIGAIIEGPIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
GGLIGLVFGLFSMYQAFTAPMPTSFMFWNPIIALVPRILIGVVSYYVYASMIKGSKKNLK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ATSIISSLILGVLLFVSSEALTDSLTISAIIGVLFFLASMIIMFKFKHKNKEEALSIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SVIGTLTNTIGVLGLTYVFYLERYASALGISEHAAKLTLAGIGVTNGIPEAFISALISIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VILGVRKILR
HHHHHHHHHC
>Mature Secondary Structure
MNAVYQTRQKTRKLVVIGMLSGISIFLGLTGLGFINIPPVKATIMHIPVIIGAIIEGPIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHH
GGLIGLVFGLFSMYQAFTAPMPTSFMFWNPIIALVPRILIGVVSYYVYASMIKGSKKNLK
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ATSIISSLILGVLLFVSSEALTDSLTISAIIGVLFFLASMIIMFKFKHKNKEEALSIGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SVIGTLTNTIGVLGLTYVFYLERYASALGISEHAAKLTLAGIGVTNGIPEAFISALISIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VILGVRKILR
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA