Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310359

Identifier: 18310359

GI number: 18310359

Start: 1628835

End: 1629248

Strand: Reverse

Name: 18310359

Synonym: CPE1377

Alternate gene names: NA

Gene position: 1629248-1628835 (Counterclockwise)

Preceding gene: 18310360

Following gene: 18310358

Centisome position: 53.75

GC content: 24.64

Gene sequence:

>414_bases
ATGTTTTTAAAAGAGTTAAATAAAGAACAAGGATTAGCATTTATAAATTTAGTAACTGAATTTGCTTTAGCTGATGAGAA
TATCAAAAAAGAAGAAGAAGATTTAATTCGTACATATATGAAGGAATTAGATTTAGAAGAAGAGGAATTAGGAAATCTTT
CATATGAAGAATCAATAAAAACTATAAAAAATTCATCAGAAAAGGTTAAAAATATTGTTTATTTTGAACTTGTCAGAATA
GGACTTGTTGATGAGGATTATGATATAGAAGAAGTTGATTTCTTAGAAAAAATAAGCAAAGATTTAAATATATCAAGAGC
TAAAAAAATACAAGTAGCTAATTGTTTCTATAACTTCTCAGAAAAAGATGGAGAAGCAAAATTAGAGGAAATGGCAAAAG
ATATAATAGGATAA

Upstream 100 bases:

>100_bases
ATTTCTTAATTAAAAATTAACCTTAAAGCCTTTGTTATACTAAATTTTTTATAGTATATTATTAATAAGCTAAAAATTTA
TTTATACGGAGGGATAAGCA

Downstream 100 bases:

>100_bases
TAAAAAATAGAATCGGCTGTATCAAAATATAAGAATAAAAATTATTTTGGTATAAGCCTTTTTTATTTAATTATATGGAA
AAATATGTATAATAGGGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MFLKELNKEQGLAFINLVTEFALADENIKKEEEDLIRTYMKELDLEEEELGNLSYEESIKTIKNSSEKVKNIVYFELVRI
GLVDEDYDIEEVDFLEKISKDLNISRAKKIQVANCFYNFSEKDGEAKLEEMAKDIIG

Sequences:

>Translated_137_residues
MFLKELNKEQGLAFINLVTEFALADENIKKEEEDLIRTYMKELDLEEEELGNLSYEESIKTIKNSSEKVKNIVYFELVRI
GLVDEDYDIEEVDFLEKISKDLNISRAKKIQVANCFYNFSEKDGEAKLEEMAKDIIG
>Mature_137_residues
MFLKELNKEQGLAFINLVTEFALADENIKKEEEDLIRTYMKELDLEEEELGNLSYEESIKTIKNSSEKVKNIVYFELVRI
GLVDEDYDIEEVDFLEKISKDLNISRAKKIQVANCFYNFSEKDGEAKLEEMAKDIIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15971; Mature: 15971

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKELNKEQGLAFINLVTEFALADENIKKEEEDLIRTYMKELDLEEEELGNLSYEESIK
CCHHHCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHH
TIKNSSEKVKNIVYFELVRIGLVDEDYDIEEVDFLEKISKDLNISRAKKIQVANCFYNFS
HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
EKDGEAKLEEMAKDIIG
CCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MFLKELNKEQGLAFINLVTEFALADENIKKEEEDLIRTYMKELDLEEEELGNLSYEESIK
CCHHHCCHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHH
TIKNSSEKVKNIVYFELVRIGLVDEDYDIEEVDFLEKISKDLNISRAKKIQVANCFYNFS
HHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
EKDGEAKLEEMAKDIIG
CCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA