Click here to switch to the map view.

The map label for this gene is 18310358

Identifier: 18310358

GI number: 18310358

Start: 1628362

End: 1628697

Strand: Reverse

Name: 18310358

Synonym: CPE1376

Alternate gene names: NA

Gene position: 1628697-1628362 (Counterclockwise)

Preceding gene: 18310359

Following gene: 18310357

Centisome position: 53.73

GC content: 25.6

Gene sequence:

>336_bases
ATGGGAAGTAAAGTTTTTGAGAGAAAAAATAGAGTTTATAATTTAAAATATAGTGATGATATAAGTAAAATTTGTAAACC
TTATAAAATAGCTTCAAATATAGCTTGTATTGTAGTTGTAATTGCATTAGTAGAGCCTAGAGTTTTATTACCTACTTTTT
TATTAAGCCTATTAATGTTTTTAAGTAAGAAAATGAAAGTATCATGGAGGGTGAGTACTTTTTTAGAAAAGGTGAGAAAT
GGAAGAAGTGATGAGGGAGAAAAGATTTTAAGTAAATTACAAGGGGATATAGAGGATCCTATTTATAAAGAACTTAAAGA
GTTATTAAAAATATAA

Upstream 100 bases:

>100_bases
AAAATTATTTTGGTATAAGCCTTTTTTATTTAATTATATGGAAAAATATGTATAATAGGGTTATAATTGAATTGTTAAGT
TATTAATAGGGGGAGAATAT

Downstream 100 bases:

>100_bases
AAATTATCATTGACATAGAGGATAAAAGAATTAAAATAATTTAATAGGAACAGGAGATGATAATTAAAATGAATAATAAA
TACATGGTTGTAATTTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MGSKVFERKNRVYNLKYSDDISKICKPYKIASNIACIVVVIALVEPRVLLPTFLLSLLMFLSKKMKVSWRVSTFLEKVRN
GRSDEGEKILSKLQGDIEDPIYKELKELLKI

Sequences:

>Translated_111_residues
MGSKVFERKNRVYNLKYSDDISKICKPYKIASNIACIVVVIALVEPRVLLPTFLLSLLMFLSKKMKVSWRVSTFLEKVRN
GRSDEGEKILSKLQGDIEDPIYKELKELLKI
>Mature_110_residues
GSKVFERKNRVYNLKYSDDISKICKPYKIASNIACIVVVIALVEPRVLLPTFLLSLLMFLSKKMKVSWRVSTFLEKVRNG
RSDEGEKILSKLQGDIEDPIYKELKELLKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12822; Mature: 12690

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKVFERKNRVYNLKYSDDISKICKPYKIASNIACIVVVIALVEPRVLLPTFLLSLLMF
CCCHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LSKKMKVSWRVSTFLEKVRNGRSDEGEKILSKLQGDIEDPIYKELKELLKI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
GSKVFERKNRVYNLKYSDDISKICKPYKIASNIACIVVVIALVEPRVLLPTFLLSLLMF
CCHHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LSKKMKVSWRVSTFLEKVRNGRSDEGEKILSKLQGDIEDPIYKELKELLKI
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA