Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310360

Identifier: 18310360

GI number: 18310360

Start: 1629448

End: 1630359

Strand: Reverse

Name: 18310360

Synonym: CPE1378

Alternate gene names: NA

Gene position: 1630359-1629448 (Counterclockwise)

Preceding gene: 18310361

Following gene: 18310359

Centisome position: 53.78

GC content: 27.08

Gene sequence:

>912_bases
ATGTATGTGATTAACTTTATAAGAGGGTTTTTAATGGCTTTAGCAGATAGTGTTCCAGGGGTTTCTGGTGGTACTATAGC
ATTTATAATGGGATTTTATAATAAGTTTATAAGTTCATTAAATGCTTTAACATCTACAAAAAAAACTGATGTAAGCAAAA
AAGATGCTATAATATTCTTATTAAAATTAGGAATAGGTTGGATAACTGGTATGGTTTTATCAATATTATTTATAGCATCA
ATATTTGATAAAGAAATATATAAAATCAGTTCTTTATTTACTGGATTTATAATATTTTCTATACCAATAATAATTAGTGA
AGACAAAGAATCATTAAAGAAAAACTATGGATACATAATATATGCTATTTTAGGAATAGCTATTGTTGCTGCAATAACAT
ATTTTAATCCAGCTACAGGAAGTGCAAAAGGAACAAGTTTAGTATTAAATGAGTTTTCATTACCACTTGCACTATATGTT
TTCTTTGCTGGAATGATTGCTATATCAGCAATGGTTTTACCAGGGATATCAGGATCAACATTACTTTTAATATTTGGTCT
TTATGCACCTGTTGTAAATGGAGTGAAAGAAGTTTTAACATTTAATTTTAGTTATTTACCTATGCTTATGGTTTTTGGAC
TAGGGGTAGTTGTAGGAATAATAACTACAATAAGATTAATAAAATTCTTACTTTCAAATTATAGGTCTCAAATGATTTAT
TTTATAATAGGATTAATGATTGGATCTATATATGCAGTTTTTATGGGACCAACTACATTAGAGATTCCAAAGGCTGCTAT
GAATTTAAGTAGCTTTAATTTCCTATTCTTTATTATAGGAGGAGCTTTAATTTTAGGATTGCAACAGTTAAAAGGATACC
TTGAGAAGAAAGAAAAAGTTTCTAATATATAA

Upstream 100 bases:

>100_bases
CAAATATTGTTATGATAATAATCTTACATTAGAGGAATTATATGATGAATTGGATATAACAAAATAATATATAAATATAA
GATTTTAAAGGAGATATACT

Downstream 100 bases:

>100_bases
AAAATATATAGTAGCTGTCATTACGTAGAAGTAATGACAGCTTTTTCTTTAATATTGTAGATTTTTAGAATATAATAAGA
GAAATAGAGGATTGTAGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MYVINFIRGFLMALADSVPGVSGGTIAFIMGFYNKFISSLNALTSTKKTDVSKKDAIIFLLKLGIGWITGMVLSILFIAS
IFDKEIYKISSLFTGFIIFSIPIIISEDKESLKKNYGYIIYAILGIAIVAAITYFNPATGSAKGTSLVLNEFSLPLALYV
FFAGMIAISAMVLPGISGSTLLLIFGLYAPVVNGVKEVLTFNFSYLPMLMVFGLGVVVGIITTIRLIKFLLSNYRSQMIY
FIIGLMIGSIYAVFMGPTTLEIPKAAMNLSSFNFLFFIIGGALILGLQQLKGYLEKKEKVSNI

Sequences:

>Translated_303_residues
MYVINFIRGFLMALADSVPGVSGGTIAFIMGFYNKFISSLNALTSTKKTDVSKKDAIIFLLKLGIGWITGMVLSILFIAS
IFDKEIYKISSLFTGFIIFSIPIIISEDKESLKKNYGYIIYAILGIAIVAAITYFNPATGSAKGTSLVLNEFSLPLALYV
FFAGMIAISAMVLPGISGSTLLLIFGLYAPVVNGVKEVLTFNFSYLPMLMVFGLGVVVGIITTIRLIKFLLSNYRSQMIY
FIIGLMIGSIYAVFMGPTTLEIPKAAMNLSSFNFLFFIIGGALILGLQQLKGYLEKKEKVSNI
>Mature_303_residues
MYVINFIRGFLMALADSVPGVSGGTIAFIMGFYNKFISSLNALTSTKKTDVSKKDAIIFLLKLGIGWITGMVLSILFIAS
IFDKEIYKISSLFTGFIIFSIPIIISEDKESLKKNYGYIIYAILGIAIVAAITYFNPATGSAKGTSLVLNEFSLPLALYV
FFAGMIAISAMVLPGISGSTLLLIFGLYAPVVNGVKEVLTFNFSYLPMLMVFGLGVVVGIITTIRLIKFLLSNYRSQMIY
FIIGLMIGSIYAVFMGPTTLEIPKAAMNLSSFNFLFFIIGGALILGLQQLKGYLEKKEKVSNI

Specific function: Unknown

COG id: COG2035

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33063; Mature: 33063

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVINFIRGFLMALADSVPGVSGGTIAFIMGFYNKFISSLNALTSTKKTDVSKKDAIIFL
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHH
LKLGIGWITGMVLSILFIASIFDKEIYKISSLFTGFIIFSIPIIISEDKESLKKNYGYII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCCHHH
YAILGIAIVAAITYFNPATGSAKGTSLVLNEFSLPLALYVFFAGMIAISAMVLPGISGST
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LLLIFGLYAPVVNGVKEVLTFNFSYLPMLMVFGLGVVVGIITTIRLIKFLLSNYRSQMIY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIIGLMIGSIYAVFMGPTTLEIPKAAMNLSSFNFLFFIIGGALILGLQQLKGYLEKKEKV
HHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNI
CCC
>Mature Secondary Structure
MYVINFIRGFLMALADSVPGVSGGTIAFIMGFYNKFISSLNALTSTKKTDVSKKDAIIFL
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHH
LKLGIGWITGMVLSILFIASIFDKEIYKISSLFTGFIIFSIPIIISEDKESLKKNYGYII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCCHHH
YAILGIAIVAAITYFNPATGSAKGTSLVLNEFSLPLALYVFFAGMIAISAMVLPGISGST
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LLLIFGLYAPVVNGVKEVLTFNFSYLPMLMVFGLGVVVGIITTIRLIKFLLSNYRSQMIY
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIIGLMIGSIYAVFMGPTTLEIPKAAMNLSSFNFLFFIIGGALILGLQQLKGYLEKKEKV
HHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SNI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA