| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310337
Identifier: 18310337
GI number: 18310337
Start: 1599782
End: 1600150
Strand: Reverse
Name: 18310337
Synonym: CPE1355
Alternate gene names: NA
Gene position: 1600150-1599782 (Counterclockwise)
Preceding gene: 18310339
Following gene: 18310336
Centisome position: 52.79
GC content: 21.41
Gene sequence:
>369_bases ATGAATAAAAATGATTTAAATAAAGTTGAAGAAGGATATTATGGGAATAAAGAAGATTATTATGATAAGCAAGGGCATTG TTACACTAGTTTTTTTATAAGTGATATTATTATAGATAACAATAAGAAAGGTAGCGTTACAATAAATAATAATTTTGATA TTTCTAAAGAAAAAAAAGATTTTTTGAAAGAAGAACTTTTAAAATATTTTAAACTTGAAAAAAATGAAAGTTTAGATGAT GAAGAGTTAGATAAACTTATAAGATTTTTTGTAGAAAATTTAGGAGCACAATTTTATATACAGGGTGTTATAGATTCTTA TAAATATATTGTTGAAAAATCTGATGATTTGTTAAGTGTAGAAAGATGA
Upstream 100 bases:
>100_bases TAAAGATTAAAATAATATATTAAGTAACTTTAATATGATTGGTGAATAAAATGTATTATATGGGATATATTCCAAATTTA TTTAGAAGGCGTGAATTTGT
Downstream 100 bases:
>100_bases TAGAACATAGAAGTTGTCCAATTTAAATAGAGACAACTTCTTTTTTTGTTATTTTTGATATTTTTTTGTAACTGTTTTAT TGATAAATTTTACTAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MNKNDLNKVEEGYYGNKEDYYDKQGHCYTSFFISDIIIDNNKKGSVTINNNFDISKEKKDFLKEELLKYFKLEKNESLDD EELDKLIRFFVENLGAQFYIQGVIDSYKYIVEKSDDLLSVER
Sequences:
>Translated_122_residues MNKNDLNKVEEGYYGNKEDYYDKQGHCYTSFFISDIIIDNNKKGSVTINNNFDISKEKKDFLKEELLKYFKLEKNESLDD EELDKLIRFFVENLGAQFYIQGVIDSYKYIVEKSDDLLSVER >Mature_122_residues MNKNDLNKVEEGYYGNKEDYYDKQGHCYTSFFISDIIIDNNKKGSVTINNNFDISKEKKDFLKEELLKYFKLEKNESLDD EELDKLIRFFVENLGAQFYIQGVIDSYKYIVEKSDDLLSVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14496; Mature: 14496
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNDLNKVEEGYYGNKEDYYDKQGHCYTSFFISDIIIDNNKKGSVTINNNFDISKEKKD CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH FLKEELLKYFKLEKNESLDDEELDKLIRFFVENLGAQFYIQGVIDSYKYIVEKSDDLLSV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHCCCCCEEEC ER CC >Mature Secondary Structure MNKNDLNKVEEGYYGNKEDYYDKQGHCYTSFFISDIIIDNNKKGSVTINNNFDISKEKKD CCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH FLKEELLKYFKLEKNESLDDEELDKLIRFFVENLGAQFYIQGVIDSYKYIVEKSDDLLSV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHCCCCCEEEC ER CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA